Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq307 489 3e-136 seq13 190 4e-46 seq18 91.5 3e-16 >seq307 Length=335 Score = 489 bits (542), Expect = 3e-136 Identities = 294/309 (95%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct 310 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 251 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 250 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 191 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| Sbjct 190 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTAATCTCCTTGACCG 131 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 AAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 71 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 70 CTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 11 Query 320 CCCTTTGTA 328 || |||||| Sbjct 10 CCTTTTGTA 2 >seq13 Length=1759894 Score = 190 bits (210), Expect = 4e-46 Identities = 148/178 (83%), Gaps = 10/178 (6%) Strand=Plus/Minus Query 151 CCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGG 210 ||||||||||| ||| ||||||||||||||||||| ||| ||||| ||| ||| ||||| Sbjct 1113557 CCGCACGCGCGGTACGCTGACAGAGCCAACGAGTTAATCTCCTTGACCGAAAGATCTGGT 1113498 Query 211 TAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 270 |||||||||| |||||||||||||||| | ||||||||||| ||| || ||||||||||| Sbjct 1113497 TAATCTTGTTGAACTCTGTCGTGCTGGTGGTAGAGCATTGCGATTGTTACTCTTCAACGA 1113438 Query 271 GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| ||||||||| |||||| |||||||||||| ||||| Sbjct 1113437 GGAATGCCTA----------GTCATCAGCTTGCGTTGGTTACGTCCCTGCATATTGTA 1113390 >seq18 Length=1294659 Score = 91.5 bits (100), Expect = 3e-16 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 23 CGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGG 82 ||||||||||||||||||||||||| ||| |||||||| |||||| |||||||||||| Sbjct 635919 CGAGACCTTAACCTGCTAAATAGCCGGGCTAGCTTTGGCTGGTCGCTAGCTTCTTAGAGG 635978 Query 83 GACTA 87 ||||| Sbjct 635979 GACTA 635983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947196495360