Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq307 489 3e-136
seq13 190 4e-46
seq18 91.5 3e-16
>seq307
Length=335
Score = 489 bits (542), Expect = 3e-136
Identities = 294/309 (95%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||
Sbjct 310 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 251
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 250 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 191
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||
Sbjct 190 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTAATCTCCTTGACCG 131
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 AAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 71
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 70 CTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 11
Query 320 CCCTTTGTA 328
|| ||||||
Sbjct 10 CCTTTTGTA 2
>seq13
Length=1759894
Score = 190 bits (210), Expect = 4e-46
Identities = 148/178 (83%), Gaps = 10/178 (6%)
Strand=Plus/Minus
Query 151 CCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGG 210
||||||||||| ||| ||||||||||||||||||| ||| ||||| ||| ||| |||||
Sbjct 1113557 CCGCACGCGCGGTACGCTGACAGAGCCAACGAGTTAATCTCCTTGACCGAAAGATCTGGT 1113498
Query 211 TAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 270
|||||||||| |||||||||||||||| | ||||||||||| ||| || |||||||||||
Sbjct 1113497 TAATCTTGTTGAACTCTGTCGTGCTGGTGGTAGAGCATTGCGATTGTTACTCTTCAACGA 1113438
Query 271 GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||||||| ||||||||| |||||| |||||||||||| |||||
Sbjct 1113437 GGAATGCCTA----------GTCATCAGCTTGCGTTGGTTACGTCCCTGCATATTGTA 1113390
>seq18
Length=1294659
Score = 91.5 bits (100), Expect = 3e-16
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 23 CGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGG 82
||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||
Sbjct 635919 CGAGACCTTAACCTGCTAAATAGCCGGGCTAGCTTTGGCTGGTCGCTAGCTTCTTAGAGG 635978
Query 83 GACTA 87
|||||
Sbjct 635979 GACTA 635983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947196495360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |