Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq208 719 0.0
seq14 170 6e-40
seq17 86.0 2e-14
seq3 82.4 2e-13
>seq208
Length=623
Score = 719 bits (796), Expect = 0.0
Identities = 415/425 (98%), Gaps = 1/425 (0%)
Strand=Plus/Plus
Query 80 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG 139
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTTTCTCAGGCTCCTTCTCCGG 60
Query 140 AATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCG 199
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 61 AATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATCCTACCATCG 120
Query 200 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTT 259
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 121 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCACAAGGCCATGCGATTCGTT 180
Query 260 AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 319
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 181 AAGTTATTATGAATCACCAGGGAGCCCCGAAGGGCATTGGTTTTTTATCTAATAAATACA 240
Query 320 CCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 379
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 300
Query 380 GTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 301 GTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAG 360
Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 419
Query 500 GGCAG 504
|||||
Sbjct 420 GGCAG 424
>seq14
Length=1736658
Score = 170 bits (188), Expect = 6e-40
Identities = 102/106 (96%), Gaps = 1/106 (1%)
Strand=Plus/Minus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 344832 CATGTATTAGCTCTAGAATTACCACGGTTATCCATATAGTAAGGTACTATCAAATAAACG 344773
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCT 450
|||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct 344772 ATAACTGATTTAATAAGCCATTCGCAGTTTCACAGTATAG-TTGCT 344728
>seq17
Length=1302396
Score = 86.0 bits (94), Expect = 2e-14
Identities = 82/104 (79%), Gaps = 2/104 (2%)
Strand=Plus/Minus
Query 164 CCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223
||||||| |||||||||||||| ||| | |||| |||| |||| || |||| || |||
Sbjct 469583 CCGTTGAAACCATGGTAGGCCATTATATTGCCATTGAAATTTGACTGGTCAGAGATCTGA 469524
Query 224 ATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATT 267
||||||||| | ||| || ||||||||||| || || ||||
Sbjct 469523 ATGAACCATTTCTGGCACA--GCCATGCGATTTGTCGAGCTATT 469482
>seq3
Length=2685496
Score = 82.4 bits (90), Expect = 2e-13
Identities = 55/60 (92%), Gaps = 1/60 (2%)
Strand=Plus/Plus
Query 394 TCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTAT 453
||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||| ||
Sbjct 281609 TCAAATAAACGATAACTGATTTAATAAGCCATTCACAGTTTCACAGTATAG-TTGCTCAT 281667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510394411520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |