Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq232 235 8e-60 seq22 113 7e-23 >seq232 Length=679 Score = 235 bits (260), Expect = 8e-60 Identities = 178/206 (86%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 3 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 60 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 61 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 120 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| ||||| ||| |||||||| | ||||||||||||||||||| Sbjct 121 ACCCAGACCTTTCGGACAAGGAGATTAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 180 Query 180 GCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||||||||||||||||| Sbjct 181 GCCCAGAACATCTAAGGGCATCACAG 206 >seq22 Length=739720 Score = 113 bits (124), Expect = 7e-23 Identities = 136/182 (75%), Gaps = 15/182 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||||| ||||||| |||| ||||||| ||| ||| | Sbjct 94330 GTACAACATGCAGGGACGTAATCAACGCAAGCT-GATGACT----------AGGCATT-C 94377 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA--AAGAT 118 ||||||||||| || |||||||||| |||||| ||| ||||| | | |||| ||||| Sbjct 94378 CTCGTTGAAGAGTAATAATTGCAATGCTCTATCACCAGCACGA-CAGAGTTCAACAAGAT 94436 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 || || | ||| |||| ||||| ||| |||||||| | |||| ||| |||||||| Sbjct 94437 TAACCAGGCCTTTCGGTCAAGGAGATCAACTCGTTGGCTCTGTCAGAGTACCGCGCGTGA 94496 Query 179 GG 180 || Sbjct 94497 GG 94498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996896590