Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq232 235 8e-60
seq22 113 7e-23
>seq232
Length=679
Score = 235 bits (260), Expect = 8e-60
Identities = 178/206 (86%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 3 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 60
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 61 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 120
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| |||| ||||| ||| |||||||| | |||||||||||||||||||
Sbjct 121 ACCCAGACCTTTCGGACAAGGAGATTAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 180
Query 180 GCCCAGAACATCTAAGGGCATCACAG 205
||||||||||||||||||||||||||
Sbjct 181 GCCCAGAACATCTAAGGGCATCACAG 206
>seq22
Length=739720
Score = 113 bits (124), Expect = 7e-23
Identities = 136/182 (75%), Gaps = 15/182 (8%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||| ||||||||||| ||||||| |||| ||||||| ||| ||| |
Sbjct 94330 GTACAACATGCAGGGACGTAATCAACGCAAGCT-GATGACT----------AGGCATT-C 94377
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA--AAGAT 118
||||||||||| || |||||||||| |||||| ||| ||||| | | |||| |||||
Sbjct 94378 CTCGTTGAAGAGTAATAATTGCAATGCTCTATCACCAGCACGA-CAGAGTTCAACAAGAT 94436
Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|| || | ||| |||| ||||| ||| |||||||| | |||| ||| ||||||||
Sbjct 94437 TAACCAGGCCTTTCGGTCAAGGAGATCAACTCGTTGGCTCTGTCAGAGTACCGCGCGTGA 94496
Query 179 GG 180
||
Sbjct 94497 GG 94498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751996896590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |