Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq338 479 1e-132
>seq338
Length=421
Score = 479 bits (530), Expect = 1e-132
Identities = 357/413 (86%), Gaps = 4/413 (1%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
|||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||| ||
Sbjct 411 TGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTATAT 352
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 351 TTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 292
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 291 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 232
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCAC-TCTTCTGCG 260
|||| ||||||||| | | || ||| | || || || ||| || || || |
Sbjct 231 GCAATCAGACTTGCAC-TTGGTGTTCATCAGGGGTTCTTCCCCTGTGTACTTCATC-AAG 174
Query 261 GTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
||||||||||||||| | | | ||| ||||||||| | ||| ||||||| ||||||
Sbjct 173 TTCAGGCCAGCATCAGTTTGAGTGGTTAGATAAAGGCTTAGAGAACGTGGCCCTCTTCGG 114
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTA 380
||||||||||||| | |||| |||| ||| | |||||||||| ||||||| ||||||
Sbjct 113 GGGGTGTTATAGCTCTAGGTGCAATGTAGCCTACTTGGACTGAGGACCGCGCTTCGGCTA 54
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433
|||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 53 GGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079990862300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |