Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq338 479 1e-132 >seq338 Length=421 Score = 479 bits (530), Expect = 1e-132 Identities = 357/413 (86%), Gaps = 4/413 (1%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 |||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||| || Sbjct 411 TGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTATAT 352 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 351 TTCATCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 292 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 291 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 232 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCAC-TCTTCTGCG 260 |||| ||||||||| | | || ||| | || || || ||| || || || | Sbjct 231 GCAATCAGACTTGCAC-TTGGTGTTCATCAGGGGTTCTTCCCCTGTGTACTTCATC-AAG 174 Query 261 GTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 ||||||||||||||| | | | ||| ||||||||| | ||| ||||||| |||||| Sbjct 173 TTCAGGCCAGCATCAGTTTGAGTGGTTAGATAAAGGCTTAGAGAACGTGGCCCTCTTCGG 114 Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTA 380 ||||||||||||| | |||| |||| ||| | |||||||||| ||||||| |||||| Sbjct 113 GGGGTGTTATAGCTCTAGGTGCAATGTAGCCTACTTGGACTGAGGACCGCGCTTCGGCTA 54 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433 |||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 53 GGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079990862300