Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq232 325 7e-87
seq22 205 2e-50
>seq232
Length=679
Score = 325 bits (360), Expect = 7e-87
Identities = 194/203 (96%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 206 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 147
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245
||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 146 AATCTCCTTGTCCGAAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 87
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 86 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGT 27
Query 306 TGATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||| ||||||
Sbjct 26 TGATTACGTCCCTGCCTTTTGTA 4
Score = 165 bits (182), Expect = 2e-38
Identities = 100/106 (94%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||
Sbjct 654 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 595
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 594 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 549
>seq22
Length=739720
Score = 205 bits (226), Expect = 2e-50
Identities = 151/178 (85%), Gaps = 10/178 (6%)
Strand=Plus/Minus
Query 151 CCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGG 210
|| |||||||| ||| ||||||||||||||||||| ||| ||||| ||| |||| ||||
Sbjct 94498 CCTCACGCGCGGTACTCTGACAGAGCCAACGAGTTGATCTCCTTGACCGAAAGGCCTGGT 94439
Query 211 TAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 270
|||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 94438 TAATCTTGTTGAACTCTGTCGTGCTGGTGATAGAGCATTGCAATTATTACTCTTCAACGA 94379
Query 271 GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct 94378 GGAATGCCTA----------GTCATCAGCTTGCGTTGATTACGTCCCTGCATGTTGTA 94331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947195964928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |