Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq352 255 2e-65
seq412 152 2e-34
seq2 131 5e-28
seq9 87.8 6e-15
>seq352
Length=352
Score = 255 bits (282), Expect = 2e-65
Identities = 143/144 (99%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 190 AGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 131
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 71
Query 418 CGAGGCATTTGGCTACCTTAAGAG 441
||||||||||||||||||||||||
Sbjct 70 CGAGGCATTTGGCTACCTTAAGAG 47
>seq412
Length=218
Score = 152 bits (168), Expect = 2e-34
Identities = 87/89 (98%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1 CCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTCAGAGCACTGGGCAG 60
Query 515 AAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||| |||||||||
Sbjct 61 AAATCACATTGCGTCAACACCACTTTCTG 89
>seq2
Length=2678696
Score = 131 bits (144), Expect = 5e-28
Identities = 89/99 (90%), Gaps = 1/99 (1%)
Strand=Plus/Minus
Query 444 TCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC-ATTCAG 502
|||| |||||||||||||||| |||||||| || || ||| |||||||||||| ||||||
Sbjct 2110374 TCATGGTTACTCCCGCCGTTTTCCCGCGCTGGGCTGGATTACTTCACTTTGACAATTCAG 2110315
Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
||||||||||||||||||| ||||||||||| ||| |||
Sbjct 2110314 AGCACTGGGCAGAAATCACTTTGCGTCAACACCACGTTC 2110276
>seq9
Length=1656127
Score = 87.8 bits (96), Expect = 6e-15
Identities = 51/53 (96%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTG 59
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 753761 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTG 753813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635193034048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |