Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq352 255 2e-65 seq412 152 2e-34 seq2 131 5e-28 seq9 87.8 6e-15 >seq352 Length=352 Score = 255 bits (282), Expect = 2e-65 Identities = 143/144 (99%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 190 AGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 131 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 71 Query 418 CGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||||||| Sbjct 70 CGAGGCATTTGGCTACCTTAAGAG 47 >seq412 Length=218 Score = 152 bits (168), Expect = 2e-34 Identities = 87/89 (98%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 CCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTCAGAGCACTGGGCAG 60 Query 515 AAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||| ||||||||| Sbjct 61 AAATCACATTGCGTCAACACCACTTTCTG 89 >seq2 Length=2678696 Score = 131 bits (144), Expect = 5e-28 Identities = 89/99 (90%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 444 TCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC-ATTCAG 502 |||| |||||||||||||||| |||||||| || || ||| |||||||||||| |||||| Sbjct 2110374 TCATGGTTACTCCCGCCGTTTTCCCGCGCTGGGCTGGATTACTTCACTTTGACAATTCAG 2110315 Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541 ||||||||||||||||||| ||||||||||| ||| ||| Sbjct 2110314 AGCACTGGGCAGAAATCACTTTGCGTCAACACCACGTTC 2110276 >seq9 Length=1656127 Score = 87.8 bits (96), Expect = 6e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTG 59 |||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 753761 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTG 753813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635193034048