Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq38 313 2e-80 >seq38 Length=269250 Score = 313 bits (346), Expect = 2e-80 Identities = 710/1060 (67%), Gaps = 16/1060 (2%) Strand=Plus/Minus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 |||| || || ||||||||||| |||| | |||| || |||||||| |||||| | Sbjct 56410 AAAGCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTTTTT 56351 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926 | ||||| | || || ||||| ||||| || ||||| |||||| || | || Sbjct 56350 CGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAACAACA 56291 Query 65927 ACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCC 65985 || || || | ||| | | | || ||||||| || || | || | || | Sbjct 56290 ACTTGGACAACCTCGT-GAAGCTTTTGGAAATCATAAG--TTCCCTCATTCATGT-TGAC 56235 Query 65986 GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGG 66045 | ||| |||| || | | | || || | ||| ||| ||| | ||| || || Sbjct 56234 G--------AAAGTTGGTAAAGCGATG-GAAGCCAAGTTACAGCAAGCAACCTCATCTGG 56184 Query 66046 AGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTG 66105 || | ||||| || ||||| ||||||| ||| || ||| || || |||| |||| Sbjct 56183 TGCAGAGTACTCAACGATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTT 56124 Query 66106 TTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAAC 66165 ||| || ||||| ||||||||||||||||| | |||| | ||| | |||||||| Sbjct 56123 TTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGT 56064 Query 66166 TTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACC 66225 ||| | ||||| |||| || |||||| | ||||| | || | | | |||| | Sbjct 56063 TTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATAGT-CTTGCGACCCTTGC 56005 Query 66226 TTTGCGTT-CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGAC 66284 | | || ||||| |||||||| ||||| || || | || || | | || Sbjct 56004 CTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAAC 55945 Query 66285 ATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAA 66344 |||||| | || || ||||| || | |||||| |||| || ||| ||||| ||| | Sbjct 55944 CTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGA 55885 Query 66345 ATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGT 66404 |||||||||| ||||| | ||||||||||||||||||||| || || || |||| | Sbjct 55884 ATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCTTTGCCAT 55825 Query 66405 GATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGG 66464 |||||||||| | || ||||||||||| | || ||||||||||| || ||||| | | Sbjct 55824 GATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAG 55765 Query 66465 CGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGA 66524 | || | || ||| || |||||||| || || || | || |||||||| | Sbjct 55764 CAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAA 55705 Query 66525 CACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTC 66584 | || | ||| || |||| |||||||| || || ||||| ||| | ||| | || Sbjct 55704 CTCGGAGCATAGGAACGATACCGTTAGAGTTTCCGTTGGTACCGGCAATGTATGCGCCAG 55645 Query 66585 GTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC 66644 || || || ||||| || ||||||||||||||||| |||| ||||| ||||| Sbjct 55644 TAGCACGGATTCGGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCAC 55585 Query 66645 AATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || || || | | || || ||||| ||| |||| ||| | ||| ||| Sbjct 55584 AAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGC 55525 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 |||| |||||| | || || || | || |||||||| || || | || || || | Sbjct 55524 ATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGA 55465 Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 |||| | | ||||| | ||||| || ||||| || ||||| | || || |||| Sbjct 55464 AGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCAATATCATCACCGTGAA 55405 Query 66825 TCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 | || | ||| ||||| | | | ||| || ||||| Sbjct 55404 TACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTC 55365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565935876640