Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq38 313 2e-80
>seq38
Length=269250
Score = 313 bits (346), Expect = 2e-80
Identities = 710/1060 (67%), Gaps = 16/1060 (2%)
Strand=Plus/Minus
Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866
|||| || || ||||||||||| |||| | |||| || |||||||| |||||| |
Sbjct 56410 AAAGCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTTTTT 56351
Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926
| ||||| | || || ||||| ||||| || ||||| |||||| || | ||
Sbjct 56350 CGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAACAACA 56291
Query 65927 ACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCC 65985
|| || || | ||| | | | || ||||||| || || | || | || |
Sbjct 56290 ACTTGGACAACCTCGT-GAAGCTTTTGGAAATCATAAG--TTCCCTCATTCATGT-TGAC 56235
Query 65986 GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGG 66045
| ||| |||| || | | | || || | ||| ||| ||| | ||| || ||
Sbjct 56234 G--------AAAGTTGGTAAAGCGATG-GAAGCCAAGTTACAGCAAGCAACCTCATCTGG 56184
Query 66046 AGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTG 66105
|| | ||||| || ||||| ||||||| ||| || ||| || || |||| ||||
Sbjct 56183 TGCAGAGTACTCAACGATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTT 56124
Query 66106 TTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAAC 66165
||| || ||||| ||||||||||||||||| | |||| | ||| | ||||||||
Sbjct 56123 TTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGT 56064
Query 66166 TTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACC 66225
||| | ||||| |||| || |||||| | ||||| | || | | | |||| |
Sbjct 56063 TTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATAGT-CTTGCGACCCTTGC 56005
Query 66226 TTTGCGTT-CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGAC 66284
| | || ||||| |||||||| ||||| || || | || || | | ||
Sbjct 56004 CTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAAC 55945
Query 66285 ATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAA 66344
|||||| | || || ||||| || | |||||| |||| || ||| ||||| ||| |
Sbjct 55944 CTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGA 55885
Query 66345 ATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGT 66404
|||||||||| ||||| | ||||||||||||||||||||| || || || |||| |
Sbjct 55884 ATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCTTTGCCAT 55825
Query 66405 GATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGG 66464
|||||||||| | || ||||||||||| | || ||||||||||| || ||||| | |
Sbjct 55824 GATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAG 55765
Query 66465 CGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGA 66524
| || | || ||| || |||||||| || || || | || |||||||| |
Sbjct 55764 CAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAA 55705
Query 66525 CACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTC 66584
| || | ||| || |||| |||||||| || || ||||| ||| | ||| | ||
Sbjct 55704 CTCGGAGCATAGGAACGATACCGTTAGAGTTTCCGTTGGTACCGGCAATGTATGCGCCAG 55645
Query 66585 GTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC 66644
|| || || ||||| || ||||||||||||||||| |||| ||||| |||||
Sbjct 55644 TAGCACGGATTCGGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCAC 55585
Query 66645 AATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704
|| || || | | || || ||||| ||| |||| ||| | ||| |||
Sbjct 55584 AAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGC 55525
Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764
|||| |||||| | || || || | || |||||||| || || | || || || |
Sbjct 55524 ATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGA 55465
Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824
|||| | | ||||| | ||||| || ||||| || ||||| | || || ||||
Sbjct 55464 AGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCAATATCATCACCGTGAA 55405
Query 66825 TCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864
| || | ||| ||||| | | | ||| || |||||
Sbjct 55404 TACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTC 55365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565935876640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |