Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq149 201 2e-49
seq1 201 2e-49
>seq149
Length=35441
Score = 201 bits (222), Expect = 2e-49
Identities = 114/116 (98%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 35 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 94
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 95 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 150
Score = 201 bits (222), Expect = 2e-49
Identities = 114/116 (98%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17506 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 17565
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 17566 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 17621
Score = 201 bits (222), Expect = 2e-49
Identities = 114/116 (98%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 30929 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 30988
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 30989 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 31044
Score = 156 bits (172), Expect = 7e-36
Identities = 88/89 (99%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1364 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGA 1423
Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||
Sbjct 1424 TAGGCCACACTTTCATGGTTTGTATTCAC 1452
Score = 156 bits (172), Expect = 7e-36
Identities = 88/89 (99%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 18835 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGA 18894
Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||
Sbjct 18895 TAGGCCACACTTTCATGGTTTGTATTCAC 18923
Score = 156 bits (172), Expect = 7e-36
Identities = 88/89 (99%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 32258 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGA 32317
Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||
Sbjct 32318 TAGGCCACACTTTCATGGTTTGTATTCAC 32346
Score = 131 bits (144), Expect = 3e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| || || | ||||||||||||||||||||||||||||||
Sbjct 17009 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 17067
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 17068 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 17099
Score = 131 bits (144), Expect = 3e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| || || | ||||||||||||||||||||||||||||||
Sbjct 30432 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 30490
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 30491 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 30522
>seq1
Length=5508434
Score = 201 bits (222), Expect = 2e-49
Identities = 114/116 (98%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5456472 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 5456531
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 5456532 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 5456587
Score = 156 bits (172), Expect = 7e-36
Identities = 88/89 (99%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 5457950 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGA 5458009
Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||
Sbjct 5458010 TAGGCCACACTTTCATGGTTTGTATTCAC 5458038
Score = 131 bits (144), Expect = 3e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| || || | ||||||||||||||||||||||||||||||
Sbjct 5455975 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 5456033
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 5456034 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 5456065
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196
||| ||||| |||||| ||||||||||||||| || |||| ||||||||||||| ||
Sbjct 4787840 ATACGAAGAAGCGACATTGAAGGATCAAAAAGCGACATCGCCATGAACGCTTGGCCGCTG 4787899
Query 197 CAAGCCAGTT 206
||||||||||
Sbjct 4787900 CAAGCCAGTT 4787909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398385184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |