Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq149 618 1e-174 seq1 618 1e-174 >seq149 Length=35441 Score = 618 bits (684), Expect = 1e-174 Identities = 399/435 (92%), Gaps = 5/435 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1484 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 1543 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 1544 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 1603 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| | || |||| |||||||||||| Sbjct 1604 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACAT--AAATCCAGCCCCGCTTCATTGA 1661 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 1662 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 1718 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 1719 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 1778 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1779 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 1838 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1839 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 1898 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 1899 TGGCTACCTTAAGAG 1913 Score = 618 bits (684), Expect = 1e-174 Identities = 399/435 (92%), Gaps = 5/435 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 18955 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 19014 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 19015 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 19074 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| | || |||| |||||||||||| Sbjct 19075 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACAT--AAATCCAGCCCCGCTTCATTGA 19132 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 19133 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 19189 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 19190 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 19249 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 19250 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 19309 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19310 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 19369 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 19370 TGGCTACCTTAAGAG 19384 Score = 618 bits (684), Expect = 1e-174 Identities = 399/435 (92%), Gaps = 5/435 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 32378 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 32437 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 32438 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 32497 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| | || |||| |||||||||||| Sbjct 32498 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACAT--AAATCCAGCCCCGCTTCATTGA 32555 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 32556 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 32612 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 32613 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 32672 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 32673 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 32732 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32733 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 32792 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 32793 TGGCTACCTTAAGAG 32807 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 3442 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 3501 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3502 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 3544 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 20913 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 20972 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 20973 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 21015 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 34423 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 34482 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 34483 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 34525 >seq1 Length=5508434 Score = 618 bits (684), Expect = 1e-174 Identities = 399/435 (92%), Gaps = 5/435 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 5458266 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 5458325 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 5458326 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 5458385 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| | || |||| |||||||||||| Sbjct 5458386 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACAT--AAATCCAGCCCCGCTTCATTGA 5458443 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 5458444 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 5458500 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 5458501 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 5458560 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5458561 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 5458620 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5458621 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 5458680 Query 427 TGGCTACCTTAAGAG 441 ||||||||||||||| Sbjct 5458681 TGGCTACCTTAAGAG 5458695 Score = 233 bits (258), Expect = 6e-59 Identities = 140/147 (95%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 5458070 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 5458129 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 5458130 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 5458189 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAA 153 ||||||||||||||||||| |||||| Sbjct 5458190 GGCCCGCGAAGGACCTTAAAACCAGAA 5458216 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 5460367 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 5460426 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5460427 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 5460469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635196909472