Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq149 756 0.0
seq1 756 0.0
>seq149
Length=35441
Score = 756 bits (838), Expect = 0.0
Identities = 471/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9548 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 9607
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 9608 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 9667
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 9668 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 9727
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 9728 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCA 9787
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct 9788 CAAGGCCATGCGATTCGAGCAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 9847
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 9848 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 9907
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 9908 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 9967
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 9968 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 10026
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 10027 AGACAAGCATATGACTACTGGCAG 10050
Score = 756 bits (838), Expect = 0.0
Identities = 471/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13688 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 13747
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 13748 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 13807
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 13808 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 13867
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 13868 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCA 13927
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct 13928 CAAGGCCATGCGATTCGAGCAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 13987
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 13988 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 14047
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 14048 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 14107
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 14108 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 14166
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 14167 AGACAAGCATATGACTACTGGCAG 14190
Score = 756 bits (838), Expect = 0.0
Identities = 471/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 27018 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 27077
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 27078 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 27137
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 27138 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 27197
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 27198 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCA 27257
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct 27258 CAAGGCCATGCGATTCGAGCAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 27317
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 27318 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 27377
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 27378 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 27437
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 27438 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 27496
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 27497 AGACAAGCATATGACTACTGGCAG 27520
>seq1
Length=5508434
Score = 756 bits (838), Expect = 0.0
Identities = 471/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5467404 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 5467463
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5467464 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 5467523
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 5467524 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 5467583
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 5467584 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCA 5467643
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct 5467644 CAAGGCCATGCGATTCGAGCAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 5467703
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 5467704 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 5467763
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 5467764 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 5467823
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 5467824 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 5467882
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 5467883 AGACAAGCATATGACTACTGGCAG 5467906
Score = 470 bits (520), Expect = 4e-130
Identities = 288/305 (94%), Gaps = 1/305 (0%)
Strand=Plus/Plus
Query 200 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTT 259
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 5468507 AAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCACAAGGCCATGCGATTCGAG 5468566
Query 260 AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 319
|||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 5468567 CAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAATACA 5468626
Query 320 CCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 379
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 5468627 TCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAA 5468686
Query 380 GTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439
||||||||||||||||||||||||||||||| || ||||||||||||||||||||| | |
Sbjct 5468687 GTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTCGCCG 5468746
Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5468747 TATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 5468805
Query 500 GGCAG 504
|||||
Sbjct 5468806 GGCAG 5468810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397145344
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