Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq134 255 5e-63 seq101 100 2e-16 >seq134 Length=152861 Score = 255 bits (282), Expect = 5e-63 Identities = 1214/1904 (64%), Gaps = 64/1904 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||||||| | | ||| || ||| |||| | || |||||||||||||| Sbjct 58496 ATCAACAGTGAACTGGATGGGAGCAGCGGCAGCCGTGGTGCGGAGGTAGTACATGCCGGT 58437 Query 65137 CTTGAGGCCAGCACGCCAAGCATA-GAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || | | | ||| | ||| ||||| | || | || |||| | | | || Sbjct 58436 CTTGAGACC-GAGCTTCCAGCCTGCGAAGTGCAT-GCTGGTGATCTTGCCCATTGTGGGG 58379 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| |||||||||| | ||||||||| || | | Sbjct 58378 TCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAGGCACCACGATCGGCGGAC 58319 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC-TC 65313 || | | || | ||| || |||||||| || |||||||| || |||| || || Sbjct 58318 ATTTGGAGGACCTGGCGTTGGGAAATCTCCCACACCGTCTTGTAGAG-CGACTTAATGTC 58260 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 ||||| | |||| ||||| ||||| | ||| ||||| || ||| Sbjct 58259 GTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAGAAATGATGCGGTTCTTCAT 58200 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGAC---GATTGATGAC 65430 | || |||||||| |||| ||| | || | | |||| | | | || | || Sbjct 58199 GGCATCCGACCACAAGCCCATATCTACCAGGTCCTT---CAAGAGCCAGGGGTTAACAAC 58143 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||||| || | || ||||| || |||||||| || || || || ||| | Sbjct 58142 CTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGCTCGAAGCA 58083 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 ||| | ||||| || || || | |||| ||||| ||||| || |||| | ||| Sbjct 58082 TTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGAAGCAAGCT 58023 Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 ||| || | |||| | | || | | || | ||||||| ||| | ||| Sbjct 58022 GTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGTCTCCCAGTCCCAAA--GGT-- 57967 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 || | | |||| ||||||||| || ||| | || | || || ||||| Sbjct 57966 --CGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCAGATGCTGGGGAACC 57909 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT-GGTCTCGAGTGCGG 65729 ||| ||| ||| ||||||||||| || ||||| || | || | | || | Sbjct 57908 CTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTG-CACCGAGGCCGTCAAAGCAG 57850 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 | ||||||||||| || || | || | ||||| ||||| | |||| | | Sbjct 57849 CGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGGGACTCGAAGG 57790 Query 65790 GCATACCCAT---CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGAC 65846 |||| | | ||||| | | || || ||||| || || || | ||| ||||| | Sbjct 57789 GCATGCGAAGAGCCAGGA---AGGCATCAGCAAGACCCTGGACACCGACACCAATGGGTC 57733 Query 65847 GATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906 | ||||||| ||| | ||||| | ||||||| |||| |||||||| Sbjct 57732 GGTGACGCATGTTGCTGTTGCGGGCCTCGATGATGGGGTAGTGGTTGACGTCGATAATCT 57673 Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGT 65965 ||||| ||||| || || || || ||| | | | | ||| || Sbjct 57672 TGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGT-GTAGCTTCTGGAAGTCG------ 57620 Query 65966 TTAGGA-CGATCG--GGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 ||| | | ||| | ||| | ||||| || || || | |||||||| Sbjct 57619 -TAGCAGCCCTCGTTGTAGT--------CAACAAAGGAAGGCAGAGCCAATGATGCGAGA 57569 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| ||||| | ||| || ||||| ||||||| || || ||||| || || Sbjct 57568 TTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTTGGAA 57509 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | ||| |||||||||| |||| || || || || || ||||| |||||||| | | Sbjct 57508 CTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTAGAGC 57449 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 ||| | || ||||||| || || | ||| | |||||| | ||| || | ||| Sbjct 57448 ATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGCTTCTGGGCC 57389 Query 66203 TTCACCGTACGTACCGCCCTACCTTTGC------GTTCGTAATGTTCGTAGAGGTGTTCG 66256 |||| || | || |||||||| | || || | ||||| || | ||| Sbjct 57388 TTCATGGTC--TTGCG----ACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCTCG 57335 Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316 || ||||| | || | || | || |||| | || ||||| || | ||| Sbjct 57334 AACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAG 57275 Query 66317 TCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376 || || | || || ||||| ||| || ||||| || ||||| ||||| |||| | Sbjct 57274 TCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAG 57215 Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATG 66436 || || || || || || ||||||| || ||||||| || | ||| ||||| | | Sbjct 57214 TCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACG 57155 Query 66437 TCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGG 66496 ||||| ||||| || || ||||| |||||||| | || || ||| ||| || ||| Sbjct 57154 TCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGG 57095 Query 66497 TCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTG 66556 |||||||| ||||| |||||||||||||| | ||| || | || || || || || Sbjct 57094 TCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTG 57035 Query 66557 CCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATA 66616 || ||||| ||| | ||| || || || || || ||| || || ||||| || Sbjct 57034 CCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCGATG 56975 Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAA 66674 || || ||| |||| ||||| |||||| || | |||| | | || ||||| | Sbjct 56974 CCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTC--GTAGATACCGTCGA 56917 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 || ||| |||| ||| | ||| |||| ||| || || || | || || | | Sbjct 56916 TGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCG 56857 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | ||| ||||| |||| |||||| || || | || |||||| ||||| |||| Sbjct 56856 CATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCT 56797 Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTAT 66853 | | |||| || |||| || || || |||| || ||| ||||| | | || Sbjct 56796 CCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACA-CGCATGATCATGTGC 56738 Query 66854 TGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTG 66913 ||||| || || || | | | | ||| | || | |||||| || || || |||||| Sbjct 56737 TGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTG 56678 Query 66914 ATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 | || ||||| ||| |||||||| ||| |||||||| Sbjct 56677 AAGCCGAAGTATTGGTAGTTGAAATCACGGTCATAGACGATGGC 56634 >seq101 Length=835023 Score = 100 bits (110), Expect = 2e-16 Identities = 278/423 (66%), Gaps = 5/423 (1%) Strand=Plus/Plus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 || |||||| | || |||||||| | || || | ||||| ||| | ||||| ||||| Sbjct 111505 GTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCCATCTTCTGGCTCAAGAAGCGTGGT 111564 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| || |||| ||| ||| ||| | || || || || |||||| |||| Sbjct 111565 CTCATGCCTGGCTTGACATTCTCCAACGAGCTCATTTCTCGTGATGAGGGCCTGCACACC 111624 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689 || || || | | ||| | | || || ||| || | || || | Sbjct 111625 GACTTCGCCTGTCTCCTACACTCTCACT---TGAAGAACCGAGCCAGCAAGCAGATCATT 111681 Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749 ||||||| | || || || | ||||| ||||| || ||||| || || |||| Sbjct 111682 CGTGAGATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGGCACTGCCT 111741 Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 | | || | |||||||| | | || ||| ||| || || || |||||||||||| Sbjct 111742 TGCGCTCTTCTGGGCATGAACTCGGACCTCATGAAGCAATACATCGAGTTTGTTGCCGAC 111801 Query 61810 CGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTT 61868 ||||| | || | | |||| | | || ||| || || | ||||| || || || Sbjct 111802 CGTCTTCTTGTGGCACTTGGCAACG-AGAAGATTTACAAGTCTGCCAACCCCTTCGACTT 111860 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 |||||| | || || || | |||||||| || || |||||||| ||||| || || || Sbjct 111861 CATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTA 111920 Query 61929 TCA 61931 || Sbjct 111921 CCA 111923 Score = 98.7 bits (108), Expect = 8e-16 Identities = 226/336 (67%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | ||||| | ||| || Sbjct 111025 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 111084 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | |||||| | ||| | | || || || || || Sbjct 111085 TCCAAGGATCAACACGACTGGAACAATCGTCTGACTTCCGACGAGCAGTTCTTTATCTCT 111144 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||||||||| || || || ||||||||||| || || | || || Sbjct 111145 CACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGAGCGA 111204 Query 61264 TTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| ||| ||||| || | | ||||| || || ||||| || || || || || Sbjct 111205 TTCAGCG-GCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTATGGTTTTCAAATCATGAT 111263 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || ||||||| |||| ||| | ||||| ||||| ||||||| ||||| || Sbjct 111264 GGAAAACATCCACTCTGAGACCTACTCATTGCTCATTGATACCTACATCAAGGAGCCTGC 111323 Query 61383 GGAACG---TGAACGATTGTTCAATGCCATCGAGAC 61415 |||| | | | | ||||||||||| ||||| Sbjct 111324 CCAACGCACTTACC---TCTTCAATGCCATTGAGAC 111356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567084226960