Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq121 724 0.0 seq151 719 0.0 seq83 165 3e-38 >seq121 Length=11592 Score = 724 bits (802), Expect = 0.0 Identities = 565/664 (85%), Gaps = 14/664 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 6296 TGTAAAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 6355 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6356 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 6415 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 6416 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTC 6475 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 |||||||||| | |||| ||| || || ||| | |||||||||||| | | Sbjct 6476 ATGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 6533 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||||| ||| | |||||||||| |||||||||||| |||| || Sbjct 6534 CCAGGCCAGCATCAGTTCGCTGTGGGGGATAAAGGCTTCGGGAATGTGGCTCCCT--CGG 6591 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCG-CCTGGACTGAGGTCCGCGCTCCGGCTA 380 | ||||||||||||| ||| ||| | || | ||||||||||| ||||| || | Sbjct 6592 GAGTGTTATAGCCCGTCGTGTAATAC--CCTGTGGTGGACTGAGGTTCGCGCATTCGCAA 6649 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||||||||||| | |||| ||||||||| |||||||||||||||||| | Sbjct 6650 GGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 6708 Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 || |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 6709 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 6768 Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || ||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 6769 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 6824 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 || | |||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 6825 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 6884 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 |||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||| Sbjct 6885 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 6944 Query 680 GCGA 683 |||| Sbjct 6945 GCGA 6948 >seq151 Length=1813609 Score = 719 bits (796), Expect = 0.0 Identities = 564/664 (85%), Gaps = 14/664 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 672964 TGTAAAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 673023 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 673024 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 673083 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 673084 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTC 673143 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 |||||||||| | |||| ||| || || ||| | |||||||||||| | | Sbjct 673144 ATGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 673201 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 |||||||||||||| ||| | |||||||||| |||||||||||| |||| || Sbjct 673202 CCAGGCCAGCATCAGTTCGCTGTGGGGGATAAAGGCTTCGGGAATGTGGCTCCCT--CGG 673259 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCG-CCTGGACTGAGGTCCGCGCTCCGGCTA 380 | ||||||||||||| ||| ||| | || | ||||||||||| ||||| || | Sbjct 673260 GAGTGTTATAGCCCGTCGTGTAATAC--CCTGTGGTGGACTGAGGTTCGCGCATTCGCAA 673317 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||| ||||||||||||| | |||| ||||||||| |||||||||||||||||| | Sbjct 673318 GGATTCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 673376 Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 || |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| || Sbjct 673377 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 673436 Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || ||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 673437 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 673492 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 || | |||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 673493 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 673552 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 |||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||| Sbjct 673553 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 673612 Query 680 GCGA 683 |||| Sbjct 673613 GCGA 673616 >seq83 Length=901447 Score = 165 bits (182), Expect = 3e-38 Identities = 168/212 (79%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 245 GGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGA 304 |||||||||||| | | |||||||||||||| ||| | |||||||||| ||||| Sbjct 102515 GGTGCACTCTTCCG-GCCCAGGCCAGCATCAGTTCGCTGTGGGGGATAAAGGCTTCGGGA 102573 Query 305 ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCC-TGGACTGA 363 ||||||| |||| ||| ||||||||||||| ||| ||| | || | |||||||| Sbjct 102574 ATGTGGCTCCCTC--GGGAGTGTTATAGCCCGTCGTGTAATAC--CCTGTGGTGGACTGA 102629 Query 364 GGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 ||| ||||| || ||||||||||||||||||| | |||| ||||||||| |||||| Sbjct 102630 GGTTCGCGCATTCGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACG 102689 Query 424 GACCAAGGAGTCTAACATC-TATGCGAGTGTT 454 |||||||||||| | || |||||||||||| Sbjct 102690 GACCAAGGAGTC-GTCTTCGTATGCGAGTGTT 102720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079996310600