Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq121 724 0.0
seq151 719 0.0
seq83 165 3e-38
>seq121
Length=11592
Score = 724 bits (802), Expect = 0.0
Identities = 565/664 (85%), Gaps = 14/664 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 6296 TGTAAAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 6355
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6356 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 6415
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 6416 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTC 6475
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | |||| ||| || || ||| | |||||||||||| | |
Sbjct 6476 ATGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 6533
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||||| ||| | |||||||||| |||||||||||| |||| ||
Sbjct 6534 CCAGGCCAGCATCAGTTCGCTGTGGGGGATAAAGGCTTCGGGAATGTGGCTCCCT--CGG 6591
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCG-CCTGGACTGAGGTCCGCGCTCCGGCTA 380
| ||||||||||||| ||| ||| | || | ||||||||||| ||||| || |
Sbjct 6592 GAGTGTTATAGCCCGTCGTGTAATAC--CCTGTGGTGGACTGAGGTTCGCGCATTCGCAA 6649
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 6650 GGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 6708
Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 6709 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 6768
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 6769 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 6824
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 6825 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 6884
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||
Sbjct 6885 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 6944
Query 680 GCGA 683
||||
Sbjct 6945 GCGA 6948
>seq151
Length=1813609
Score = 719 bits (796), Expect = 0.0
Identities = 564/664 (85%), Gaps = 14/664 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 672964 TGTAAAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 673023
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 673024 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 673083
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 673084 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTC 673143
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
|||||||||| | |||| ||| || || ||| | |||||||||||| | |
Sbjct 673144 ATGACCAGACTTGGGCTTGGTTGATCATCCAGGGTTCTC-CCTGGTGCACTCTTCCG-GC 673201
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
|||||||||||||| ||| | |||||||||| |||||||||||| |||| ||
Sbjct 673202 CCAGGCCAGCATCAGTTCGCTGTGGGGGATAAAGGCTTCGGGAATGTGGCTCCCT--CGG 673259
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCG-CCTGGACTGAGGTCCGCGCTCCGGCTA 380
| ||||||||||||| ||| ||| | || | ||||||||||| ||||| || |
Sbjct 673260 GAGTGTTATAGCCCGTCGTGTAATAC--CCTGTGGTGGACTGAGGTTCGCGCATTCGCAA 673317
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||| ||||||||||||| | |||| ||||||||| |||||||||||||||||| |
Sbjct 673318 GGATTCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTCT 673376
Query 441 TC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||
Sbjct 673377 TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAGA 673436
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || ||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 673437 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCA 673492
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 673493 TACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAAC 673552
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |||
Sbjct 673553 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGG 673612
Query 680 GCGA 683
||||
Sbjct 673613 GCGA 673616
>seq83
Length=901447
Score = 165 bits (182), Expect = 3e-38
Identities = 168/212 (79%), Gaps = 8/212 (4%)
Strand=Plus/Plus
Query 245 GGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGA 304
|||||||||||| | | |||||||||||||| ||| | |||||||||| |||||
Sbjct 102515 GGTGCACTCTTCCG-GCCCAGGCCAGCATCAGTTCGCTGTGGGGGATAAAGGCTTCGGGA 102573
Query 305 ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCC-TGGACTGA 363
||||||| |||| ||| ||||||||||||| ||| ||| | || | ||||||||
Sbjct 102574 ATGTGGCTCCCTC--GGGAGTGTTATAGCCCGTCGTGTAATAC--CCTGTGGTGGACTGA 102629
Query 364 GGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423
||| ||||| || ||||||||||||||||||| | |||| ||||||||| ||||||
Sbjct 102630 GGTTCGCGCATTCGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACG 102689
Query 424 GACCAAGGAGTCTAACATC-TATGCGAGTGTT 454
|||||||||||| | || ||||||||||||
Sbjct 102690 GACCAAGGAGTC-GTCTTCGTATGCGAGTGTT 102720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996310600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |