Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq105 145 2e-32 >seq105 Length=68784 Score = 145 bits (160), Expect = 2e-32 Identities = 203/279 (73%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| |||||| ||| ||||||||||||||| | |||||||| Sbjct 60468 TAAACTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 60409 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||| Sbjct 60408 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 60349 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGAT---CAAGAGCTTCGCGT-TAGC 182 || | | |||| ||||||| || ||||||| ||| | || || | || || | Sbjct 60348 CCCTCA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAGATATTAGTATATC 60290 Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTT 241 || ||| |||||| |||||||||||||| | |||||| |||||| | | ||| Sbjct 60289 CAATTATATCTGTTAACCAGCCGGCACCGGGCAGACATCACACTCTATACTTAGATTTTT 60230 Query 242 CGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | ||| ||| ||||||||||||| | |||||||||| Sbjct 60229 AATCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 60191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797831424