Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq151 356 4e-96 seq121 356 4e-96 seq96 82.4 1e-13 >seq151 Length=1813609 Score = 356 bits (394), Expect = 4e-96 Identities = 202/205 (99%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 664720 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 664661 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 664660 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 664601 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 664600 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGG 664541 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||| Sbjct 664540 CCACACTTTCATGGTTTGTATTCAC 664516 Score = 356 bits (394), Expect = 4e-96 Identities = 202/205 (99%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677420 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 677361 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 677360 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 677301 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 677300 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGG 677241 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||| Sbjct 677240 CCACACTTTCATGGTTTGTATTCAC 677216 Score = 131 bits (144), Expect = 3e-28 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || || | |||||||||||||||||||||||||||||| Sbjct 665217 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 665159 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 665158 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 665127 Score = 131 bits (144), Expect = 3e-28 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || || | |||||||||||||||||||||||||||||| Sbjct 678090 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 678032 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 678031 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 678000 >seq121 Length=11592 Score = 356 bits (394), Expect = 4e-96 Identities = 202/205 (99%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10474 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 10415 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 10414 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 10355 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 10354 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGG 10295 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||| Sbjct 10294 CCACACTTTCATGGTTTGTATTCAC 10270 Score = 131 bits (144), Expect = 3e-28 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || || | |||||||||||||||||||||||||||||| Sbjct 10971 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 10913 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 10912 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 10881 >seq96 Length=3495428 Score = 82.4 bits (90), Expect = 1e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 ||| ||||| |||||| ||||||||||||||| || |||| ||||||||||||| || Sbjct 647201 ATACGAAGAAGCGACATTGAAGGATCAAAAAGCGACATCGCCATGAACGCTTGGCCGCTG 647142 Query 197 CAAGCCAGTT 206 |||||||||| Sbjct 647141 CAAGCCAGTT 647132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398530432