Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq151 356 4e-96
seq121 356 4e-96
seq96 82.4 1e-13
>seq151
Length=1813609
Score = 356 bits (394), Expect = 4e-96
Identities = 202/205 (99%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664720 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 664661
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 664660 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 664601
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 664600 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGG 664541
Query 271 CCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||
Sbjct 664540 CCACACTTTCATGGTTTGTATTCAC 664516
Score = 356 bits (394), Expect = 4e-96
Identities = 202/205 (99%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677420 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 677361
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 677360 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 677301
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 677300 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGG 677241
Query 271 CCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||
Sbjct 677240 CCACACTTTCATGGTTTGTATTCAC 677216
Score = 131 bits (144), Expect = 3e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| || || | ||||||||||||||||||||||||||||||
Sbjct 665217 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 665159
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 665158 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 665127
Score = 131 bits (144), Expect = 3e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| || || | ||||||||||||||||||||||||||||||
Sbjct 678090 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 678032
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 678031 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 678000
>seq121
Length=11592
Score = 356 bits (394), Expect = 4e-96
Identities = 202/205 (99%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10474 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 10415
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 10414 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 10355
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 10354 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATGTCGAGGGACTAAAGGATCGATAGG 10295
Query 271 CCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||
Sbjct 10294 CCACACTTTCATGGTTTGTATTCAC 10270
Score = 131 bits (144), Expect = 3e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| || || | ||||||||||||||||||||||||||||||
Sbjct 10971 TACTAAGCTCAATTACCATTGCGGTGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 10913
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 10912 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 10881
>seq96
Length=3495428
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196
||| ||||| |||||| ||||||||||||||| || |||| ||||||||||||| ||
Sbjct 647201 ATACGAAGAAGCGACATTGAAGGATCAAAAAGCGACATCGCCATGAACGCTTGGCCGCTG 647142
Query 197 CAAGCCAGTT 206
||||||||||
Sbjct 647141 CAAGCCAGTT 647132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398530432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |