Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq151 300 3e-79 seq121 300 3e-79 >seq151 Length=1813609 Score = 300 bits (332), Expect = 3e-79 Identities = 190/203 (94%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 671795 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTA 671854 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | || ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 671855 C-TC-CCTTGACCGGAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAG 671912 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 671913 CATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGT 671972 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||| Sbjct 671973 TGATTACGTCCCTGCCCTTTGTA 671995 Score = 147 bits (162), Expect = 4e-33 Identities = 96/106 (91%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 670106 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 670165 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 670166 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 670211 >seq121 Length=11592 Score = 300 bits (332), Expect = 3e-79 Identities = 190/203 (94%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 5049 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTA 5108 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | || ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 5109 C-TC-CCTTGACCGGAAGGTCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAG 5166 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 5167 CATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGT 5226 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||| Sbjct 5227 TGATTACGTCCCTGCCCTTTGTA 5249 Score = 147 bits (162), Expect = 4e-33 Identities = 96/106 (91%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 3769 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 3828 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3829 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 3874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198370816