Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq151 756 0.0
seq121 756 0.0
seq65 473 4e-131
>seq151
Length=1813609
Score = 756 bits (838), Expect = 0.0
Identities = 471/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 668887 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 668828
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 668827 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 668768
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 668767 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 668708
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 668707 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCA 668648
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct 668647 CAAGGCCATGCGATTCGAGCAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 668588
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 668587 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 668528
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 668527 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 668468
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 668467 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 668409
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 668408 AGACAAGCATATGACTACTGGCAG 668385
>seq121
Length=11592
Score = 756 bits (838), Expect = 0.0
Identities = 471/504 (93%), Gaps = 1/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2550 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2491
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2490 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 2431
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 2430 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 2371
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2370 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCA 2311
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct 2310 CAAGGCCATGCGATTCGAGCAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 2251
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 2250 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 2191
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||
Sbjct 2190 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 2131
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2130 GCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 2072
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 2071 AGACAAGCATATGACTACTGGCAG 2048
>seq65
Length=1074
Score = 473 bits (524), Expect = 4e-131
Identities = 301/327 (92%), Gaps = 0/327 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 268
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 267 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 208
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 207 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 148
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| || || | |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 147 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAGCCATCGCCGGCA 88
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct 87 CAAGGCCATGCGATTCGAGCAGTTATCATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 28
Query 301 TTTTTATCTAATAAATACACCCCTTCC 327
|||| |||||||||||||| |||||||
Sbjct 27 TTTTAATCTAATAAATACATCCCTTCC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397402112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |