Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq541 233 3e-59 >seq541 Length=1596 Score = 233 bits (258), Expect = 3e-59 Identities = 225/282 (80%), Gaps = 14/282 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||| |||| |||||| Sbjct 778 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 835 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 836 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 895 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| |||||| | | || |||| | ||| ||| | ||||||||| |||| | Sbjct 896 GAACGCGGTGATAC-CACCCGCACGT-ATAGATGGACAAGAATAGGCTCCGGCTTAGCGT 953 Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||||||||| | | |||| || |||||||| | | | | | ||| || Sbjct 954 CTTAGCAGGCGATTCTTCCACGGCGCTC-----GAAGCGCGTCGTGGT-ATTTCGCGTAT 1007 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| || | || ||| |||||||||||||||||| Sbjct 1008 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 1049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819194627328