Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq24 255 5e-63 seq112 100 2e-16 >seq24 Length=306188 Score = 255 bits (282), Expect = 5e-63 Identities = 1214/1904 (64%), Gaps = 64/1904 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||||||| | | ||| || ||| |||| | || |||||||||||||| Sbjct 134859 ATCAACAGTGAACTGGATGGGAGCAGCGGCAGCCGTGGTGCGGAGGTAGTACATGCCGGT 134800 Query 65137 CTTGAGGCCAGCACGCCAAGCATA-GAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || | | | ||| | ||| ||||| | || | || |||| | | | || Sbjct 134799 CTTGAGACC-GAGCTTCCAGCCTGCGAAGTGCAT-GCTGGTGATCTTGCCCATTGTGGGG 134742 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | |||||| |||||||||| | ||||||||| || | | Sbjct 134741 TCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAGGCACCACGATCGGCGGAC 134682 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC-TC 65313 || | | || | ||| || |||||||| || |||||||| || |||| || || Sbjct 134681 ATTTGGAGGACCTGGCGTTGGGAAATCTCCCACACCGTCTTGTAGAG-CGACTTAATGTC 134623 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 ||||| | |||| ||||| ||||| | ||| ||||| || ||| Sbjct 134622 GTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAGAAATGATGCGGTTCTTCAT 134563 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGAC---GATTGATGAC 65430 | || |||||||| |||| ||| | || | | |||| | | | || | || Sbjct 134562 GGCATCCGACCACAAGCCCATATCTACCAGGTCCTT---CAAGAGCCAGGGGTTAACAAC 134506 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||||| || | || ||||| || |||||||| || || || || ||| | Sbjct 134505 CTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGCTCGAAGCA 134446 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 ||| | ||||| || || || | |||| ||||| ||||| || |||| | ||| Sbjct 134445 TTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGAAGCAAGCT 134386 Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 ||| || | |||| | | || | | || | ||||||| ||| | ||| Sbjct 134385 GTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGTCTCCCAGTCCCAAA--GGT-- 134330 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 || | | |||| ||||||||| || ||| | || | || || ||||| Sbjct 134329 --CGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCAGATGCTGGGGAACC 134272 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT-GGTCTCGAGTGCGG 65729 ||| ||| ||| ||||||||||| || ||||| || | || | | || | Sbjct 134271 CTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTG-CACCGAGGCCGTCAAAGCAG 134213 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 | ||||||||||| || || | || | ||||| ||||| | |||| | | Sbjct 134212 CGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGGGGACTCGAAGG 134153 Query 65790 GCATACCCAT---CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGAC 65846 |||| | | ||||| | | || || ||||| || || || | ||| ||||| | Sbjct 134152 GCATGCGAAGAGCCAGGA---AGGCATCAGCAAGACCCTGGACACCGACACCAATGGGTC 134096 Query 65847 GATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906 | ||||||| ||| | ||||| | ||||||| |||| |||||||| Sbjct 134095 GGTGACGCATGTTGCTGTTGCGGGCCTCGATGATGGGGTAGTGGTTGACGTCGATAATCT 134036 Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGT 65965 ||||| ||||| || || || || ||| | | | | ||| || Sbjct 134035 TGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGT-GTAGCTTCTGGAAGTCG------ 133983 Query 65966 TTAGGA-CGATCG--GGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 ||| | | ||| | ||| | ||||| || || || | |||||||| Sbjct 133982 -TAGCAGCCCTCGTTGTAGT--------CAACAAAGGAAGGCAGAGCCAATGATGCGAGA 133932 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| ||||| | ||| || ||||| ||||||| || || ||||| || || Sbjct 133931 TTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTTGGAA 133872 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | ||| |||||||||| |||| || || || || || ||||| |||||||| | | Sbjct 133871 CTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTAGAGC 133812 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 ||| | || ||||||| || || | ||| | |||||| | ||| || | ||| Sbjct 133811 ATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGCTTCTGGGCC 133752 Query 66203 TTCACCGTACGTACCGCCCTACCTTTGC------GTTCGTAATGTTCGTAGAGGTGTTCG 66256 |||| || | || |||||||| | || || | ||||| || | ||| Sbjct 133751 TTCATGGTC--TTGCG----ACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCTCG 133698 Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316 || ||||| | || | || | || |||| | || ||||| || | ||| Sbjct 133697 AACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAG 133638 Query 66317 TCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376 || || | || || ||||| ||| || ||||| || ||||| ||||| |||| | Sbjct 133637 TCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAG 133578 Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATG 66436 || || || || || || ||||||| || ||||||| || | ||| ||||| | | Sbjct 133577 TCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACG 133518 Query 66437 TCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGG 66496 ||||| ||||| || || ||||| |||||||| | || || ||| ||| || ||| Sbjct 133517 TCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGG 133458 Query 66497 TCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTG 66556 |||||||| ||||| |||||||||||||| | ||| || | || || || || || Sbjct 133457 TCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTG 133398 Query 66557 CCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATA 66616 || ||||| ||| | ||| || || || || || ||| || || ||||| || Sbjct 133397 CCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCGATG 133338 Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAA 66674 || || ||| |||| ||||| |||||| || | |||| | | || ||||| | Sbjct 133337 CCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTC--GTAGATACCGTCGA 133280 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 || ||| |||| ||| | ||| |||| ||| || || || | || || | | Sbjct 133279 TGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCG 133220 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | ||| ||||| |||| |||||| || || | || |||||| ||||| |||| Sbjct 133219 CATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCT 133160 Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTAT 66853 | | |||| || |||| || || || |||| || ||| ||||| | | || Sbjct 133159 CCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACA-CGCATGATCATGTGC 133101 Query 66854 TGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTG 66913 ||||| || || || | | | | ||| | || | |||||| || || || |||||| Sbjct 133100 TGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTG 133041 Query 66914 ATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 | || ||||| ||| |||||||| ||| |||||||| Sbjct 133040 AAGCCGAAGTATTGGTAGTTGAAATCACGGTCATAGACGATGGC 132997 >seq112 Length=604763 Score = 100 bits (110), Expect = 2e-16 Identities = 278/423 (66%), Gaps = 5/423 (1%) Strand=Plus/Plus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 || |||||| | || |||||||| | || || | ||||| ||| | ||||| ||||| Sbjct 339539 GTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCCATCTTCTGGCTCAAGAAGCGTGGT 339598 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| || |||| ||| ||| ||| | || || || || |||||| |||| Sbjct 339599 CTCATGCCTGGCTTGACATTCTCCAACGAGCTCATTTCTCGTGATGAGGGCCTGCACACC 339658 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689 || || || | | ||| | | || || ||| || | || || | Sbjct 339659 GACTTCGCCTGTCTCCTACACTCTCACT---TGAAGAACCGAGCCAGCAAGCAGATCATT 339715 Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749 ||||||| | || || || | ||||| ||||| || ||||| || || |||| Sbjct 339716 CGTGAGATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGGCACTGCCT 339775 Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 | | || | |||||||| | | || ||| ||| || || || |||||||||||| Sbjct 339776 TGCGCTCTTCTGGGCATGAACTCGGACCTCATGAAGCAATACATCGAGTTTGTTGCCGAC 339835 Query 61810 CGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTT 61868 ||||| | || | | |||| | | || ||| || || | ||||| || || || Sbjct 339836 CGTCTTCTTGTGGCACTTGGCAACG-AGAAGATTTACAAGTCTGCCAACCCCTTCGACTT 339894 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 |||||| | || || || | |||||||| || || |||||||| ||||| || || || Sbjct 339895 CATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTA 339954 Query 61929 TCA 61931 || Sbjct 339955 CCA 339957 Score = 98.7 bits (108), Expect = 8e-16 Identities = 226/336 (67%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | ||||| | ||| || Sbjct 339059 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 339118 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || | |||||| | ||| | | || || || || || Sbjct 339119 TCCAAGGATCAACACGACTGGAACAATCGTCTGACTTCCGACGAGCAGTTCTTTATCTCT 339178 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||||||||| || || || ||||||||||| || || | || || Sbjct 339179 CACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGAGCGA 339238 Query 61264 TTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| ||| ||||| || | | ||||| || || ||||| || || || || || Sbjct 339239 TTCAGCG-GCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTATGGTTTTCAAATCATGAT 339297 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || ||||||| |||| ||| | ||||| ||||| ||||||| ||||| || Sbjct 339298 GGAAAACATCCACTCTGAGACCTACTCATTGCTCATTGATACCTACATCAAGGAGCCTGC 339357 Query 61383 GGAACG---TGAACGATTGTTCAATGCCATCGAGAC 61415 |||| | | | | ||||||||||| ||||| Sbjct 339358 CCAACGCACTTACC---TCTTCAATGCCATTGAGAC 339390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564719691280