Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq93 91.5 3e-16 >seq93 Length=9715 Score = 91.5 bits (100), Expect = 3e-16 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | | ||||| ||| ||| | ||| | ||||| |||| |||| || ||| | Sbjct 8544 TACTAGGTAGTATTACTATTAGGGTAA-GGTTACTAGTAGAGTAACTCTAATCTATCTTA 8486 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | | ||||||||| ||||||||||| ||| |||| ||| ||| ||| || ||||| | Sbjct 8485 TAATAGTCTAAACCTAGCTCACGTTCTCTACTAGTAGGTAAACTATCTAAAGCTTATTAA 8426 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGC 147 ||||| || |||| ||||| ||||| Sbjct 8425 ATTCTACTCTAGTATAATAGGGAGAGC 8399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854396368800