Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onygena_20corvina_20[genbank_20GCA_5F000812245.1_202014-12-31] 521 sequences; 21,705,054 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq147 823 0.0 seq383 250 1e-63 >seq147 Length=10177 Score = 823 bits (912), Expect = 0.0 Identities = 585/666 (88%), Gaps = 6/666 (1%) Strand=Plus/Minus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 5644 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGCGGGTGGTA 5585 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5584 AATTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 5525 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || | |||||||| ||| |||| |||||||| |||||||||||||||||||||||||||| Sbjct 5524 AGGTTAAAAGCACCTTGAAAAGGGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 5465 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCG--GCCCCTCGGCCGGTGCACTCTTCT 257 ||||| ||||||| | ||| | | ||| | | || | || || |||||||| | Sbjct 5464 CTTGCGGCCAGACTCGGGCGC-GGGGTTCAGCGGGTGCGCGTC-ACCCGTGCACTCCCCG 5407 Query 258 GCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 || | |||||||||||| || | || ||| ||||||||| |||||||| | | | Sbjct 5406 CCGCCCGGGCCAGCATCAGTTCTGACGACCGGTCAAAGGCCCCCGGAATGTGTCGTCTCT 5347 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG 377 |||| || |||||||| |||||| ||||||||||| | ||||||||| |||||| ||| Sbjct 5346 CGGGACGTCTTATAGCCGGGGGTGCAATGCGGCCCGTCGGGACTGAGGAACGCGCTTCGG 5287 Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 5286 CTCGGATGCTGGCGTAATGGCCGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTA 5227 Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 ||||| | ||||||||| |||||||||||||||||||| | |||||| |||||||||||| Sbjct 5226 ACATCCACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGCAGTGAAAGCGAACGGAGGTGG 5167 Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 || || | |||| |||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 5166 GAGCC--TTAGGGCGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAGGAG 5109 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 | | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5108 CGTGGCCGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 5049 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 5048 ACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGCATAG 4989 Query 678 GGGCGA 683 |||||| Sbjct 4988 GGGCGA 4983 >seq383 Length=1065 Score = 250 bits (276), Expect = 1e-63 Identities = 240/303 (79%), Gaps = 6/303 (2%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | |||||| |||||||||||||||| | ||||||| ||||||| | ||||||| Sbjct 479 TTCTAAGAGTCGGTTTGTTTGGGAATGCAGACCAAAATGGGTGGTAAATACCATCTAAAG 420 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 419 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 360 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| |||||||||| ||||| |||||||||||| |||||||| |||||| |||||| | Sbjct 359 TTGAAAAGAGAGTT-AAAAGTACGTGAAATTGTCAAAAGGGAAACGCTTGAAACCAGTAT 301 Query 214 TGCCCGCAGTTGCTCAACCGGCC--CCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGC 271 ||| |||| | |||| || || | | || ||||||||| ||| | | || || | Sbjct 300 TGCTTGCAGGTAATCAATCGTCCCTCTTGGGGCGGTGCACTTGCCTGTCGGCGGGTCAAC 241 Query 272 ATCAGCTCGGGCGGTCGGAT-AAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330 ||||| | || | |||| ||| ||| | ||| |||||||| |||||||||||||| Sbjct 240 ATCAGTTTGGTTCG--GGATAAAAAGCCAGGAGAAGGTGGCCCCTCTCGGGGGGTGTTAT 183 Query 331 AGC 333 ||| Sbjct 182 AGC 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079988824550