Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onygena_20corvina_20[genbank_20GCA_5F000812245.1_202014-12-31] 521 sequences; 21,705,054 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq147 269 4e-70 seq407 147 4e-33 seq430 134 2e-29 >seq147 Length=10177 Score = 269 bits (298), Expect = 4e-70 Identities = 230/280 (82%), Gaps = 19/280 (7%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||| | Sbjct 2522 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCATT 2465 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 2464 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 2405 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| | || ||| | || |||| | ||||| |||||| ||||||||||||||| ||| Sbjct 2404 GAAAGCGGCGATACCAGCCCCGCACGTTGTAGTTGGATACAAATAGGCTTCGGCCCTGAA 2345 Query 180 CCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 ||| | |||| ||||| ||| || || |||||| ||||| ||||||| Sbjct 2344 CCTCAACAGGTCGGCACCGGCGCTTC--------------GGCGCT-AGCTGACGGATTG 2300 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| |||||| |||| |||||||||||| |||||||||| Sbjct 2299 CAATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGAC 2260 >seq407 Length=1394 Score = 147 bits (162), Expect = 4e-33 Identities = 213/286 (74%), Gaps = 15/286 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 1342 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 1285 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 1284 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 1225 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC-CCCG 177 ||| | |||| | ||| |||||| ||| | | ||||| |||||||| | | Sbjct 1224 GAA-ACGATGATGTTGGTCCCGCACATACGAGTTGTGTTGAAATAGAGCTTCGGCTCGTG 1166 Query 178 AACCTTAGCAGGCCGGCAACGGGC--GTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCG 233 |||| | |||| ||| |||| || |||||| || ||| ||| | ||| Sbjct 1165 AACCAAATCAGGTGGGC--TGGGCTGCTCAGGCGGAAATGCCTGGGTGGCT-TGTCCGCG 1109 Query 234 GATTGCAAT-TTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| ||| ||| ||| || ||| | ||||||||||||||||| Sbjct 1108 AATTGAAATAATCA-TATGGGCGGGGGTGAATCCTTTGCAGACGAC 1064 >seq430 Length=556 Score = 134 bits (148), Expect = 2e-29 Identities = 111/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | |||| || ||| Sbjct 555 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGCTGAAAAGCTAGT 498 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | |||||| ||||||||||||||||||| |||||||||| | Sbjct 497 GCCGCGAAGCTACCATGCGTCGGATTACGGCTGAACGCCTCTAAGTCGGAATCCATGCTA 438 Query 121 GAACGGGGTGATT 133 ||||| | ||||| Sbjct 437 GAACGCGATGATT 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819195865344