Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq33 450 4e-124 seq15 367 4e-99 >seq33 Length=7983 Score = 450 bits (498), Expect = 4e-124 Identities = 295/325 (91%), Gaps = 3/325 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7662 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 7721 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 7722 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 7781 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||| |||||||||||| |||| ||| |||| ||| |||||||||||||||||| Sbjct 7782 AGCCCGCGAGGGACCTTAACGCTAGAAGTTGGGCGGTAAAGCCCAGTTCCGCTTCATTGA 7841 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| |||| |||||||||||||||| |||||||| |||||||| || Sbjct 7842 ATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 7898 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 7899 TTCTACACCCGATATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 7958 Query 307 TTTCCCCGCTGATTCCGCCAAGCCC 331 ||||||||||||||| ||||||||| Sbjct 7959 TTTCCCCGCTGATTCTGCCAAGCCC 7983 Score = 378 bits (418), Expect = 2e-102 Identities = 211/212 (99%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 60 Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 120 Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 180 Query 512 CAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||| ||||||||| Sbjct 181 CAGAAATCACATTGCGTCAACACCACTTTCTG 212 >seq15 Length=258646 Score = 367 bits (406), Expect = 4e-99 Identities = 208/211 (99%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 258645 TTCCCTTGGCTGTGGTTTCACTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCA 258586 Query 393 TTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTA 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258585 TTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTA 258526 Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258525 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 258466 Query 513 AGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||| |||||| ||||||||| Sbjct 258465 AGAAATCACATTGCATCAACACCACTTTCTG 258435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199362272