Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq33 298 9e-79
>seq33
Length=7983
Score = 298 bits (330), Expect = 9e-79
Identities = 243/283 (86%), Gaps = 10/283 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 7338 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 7281
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 7280 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 7221
Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||||| || || | || ||| |||| | ||||| |||||| |||||| || |||||||
Sbjct 7220 GAACGCGGCGA-TGTCGCCTCGCACGTTGTAGTTGGATACAAATAGGCCCTCGGGCCCCG 7162
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GA-AGCGCGGGGCGCTCAGCTGGCGGA 235
||||| |||||| |||| || ||||||||| | || | | ||||||||| || ||||||
Sbjct 7161 AACCTCAGCAGGTCGGCGAC-GGCGTCCCGGGAGAGACCCCGGGGCGCT-TGCCGGCGGA 7104
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| |||||| |||| |||||| ||||| ||||||||||
Sbjct 7103 TTGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGAC 7061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199690496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |