Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq33 298 9e-79 >seq33 Length=7983 Score = 298 bits (330), Expect = 9e-79 Identities = 243/283 (86%), Gaps = 10/283 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 7338 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 7281 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 7280 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 7221 Query 121 GAACGGGGTGATTCTCTCCT-GCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||||| || || | || ||| |||| | ||||| |||||| |||||| || ||||||| Sbjct 7220 GAACGCGGCGA-TGTCGCCTCGCACGTTGTAGTTGGATACAAATAGGCCCTCGGGCCCCG 7162 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GA-AGCGCGGGGCGCTCAGCTGGCGGA 235 ||||| |||||| |||| || ||||||||| | || | | ||||||||| || |||||| Sbjct 7161 AACCTCAGCAGGTCGGCGAC-GGCGTCCCGGGAGAGACCCCGGGGCGCT-TGCCGGCGGA 7104 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||| |||| |||||| ||||| |||||||||| Sbjct 7103 TTGCAATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGAC 7061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199690496