Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7 138 9e-28 >seq7 Length=1353353 Score = 138 bits (152), Expect = 9e-28 Identities = 455/705 (65%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 66236 TAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTG 66295 || |||||||| || || ||||| || || | || |||| || | | || | Sbjct 416218 TACTGTTCGTATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCG 416159 Query 66296 TGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 | |||||| | || | |||||| |||| || || || || ||| || | || || Sbjct 416158 TTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGA 416099 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGC 66415 ||||||||||| ||| ||||| || |||| || || | || |||||||| || Sbjct 416098 GTCCAGAGGGCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTTACCATGATTTTTACGG 416039 Query 66416 AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCC 66475 | ||| | |||||||| | ||| | ||||| ||||| || || || || || | || Sbjct 416038 AGGTCCAAAAACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCA 415979 Query 66476 ATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATC 66535 ||||| ||| || || || || || | || |||||| |||||||| | ||| Sbjct 415978 GGGCGTTTATTGCCGCCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATG 415919 Query 66536 GGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATA 66595 || | || ||| ||||| |||||| || || | ||| ||| || ||| || || Sbjct 415918 GGAATGATCCCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGATT 415859 Query 66596 TCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACT 66655 |||||| || || |||||||| || || ||||| || || |||||| || | Sbjct 415858 CGGTGAACGTTGAGTCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGT 415799 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715 || | || || ||||| || |||| || | ||| |||| ||| | Sbjct 415798 GTATCATAGATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATC 415739 Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775 || |||| ||||| | || ||| || ||||| | |||||| ||||| | | | Sbjct 415738 TGTGGTTGAGGTGTTCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGG 415679 Query 66776 GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCA 66835 ||||| | ||| ||||| || | |||||||| || |||||| || | ||| Sbjct 415678 GACATCAGGTGGTATGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCA 415619 Query 66836 CATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTA 66894 ||||| | | | || || ||||| | || | || ||||| | || || Sbjct 415618 ACGCGCATAATCATATGCTGCGGACGTTC-AGCAACTTTGCCGTTGATTCTTAGTAGATA 415560 Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || | ||||| ||||||| ||||||||| ||| |||||||| Sbjct 415559 CGACCTCTCCAGTGTCTTGAACCCAAAGTACTGGTAGTTGAAATC 415515 Score = 96.9 bits (106), Expect = 3e-15 Identities = 306/469 (65%), Gaps = 8/469 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| |||||||| || || | || ||| ||| | |||| |||||||||||||||||| Sbjct 417410 ATCAACCGTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATGCCGGT 417351 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 || | || ||| || |||||||| | | ||||||||| | | | |||| Sbjct 417350 TTTCAAACCTAATTTCCAGCCAGCAAAATGCAT-GCTAGTAATTTTGCCCATTGTGGGCT 417292 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | | ||| ||||| | || || ||||||||| || ||||||||||||||||| Sbjct 417291 CCTTAAGATGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCA 417232 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | | || ||| || || || ||||| || |||||||| ||| | ||| Sbjct 417231 TCTGAACAATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCAT 417172 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 || || | ||| | || | ||| |||| | || || |||||||| ||| Sbjct 417171 CGGGGATATTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTCATGT 417112 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTT---GAACCAAGTGACGATTGATGACTT 65432 || ||||| | || | || | ||||| || ||| | | || | || | |||| Sbjct 417111 TGTCAGACCAAAGTCCAAGGTCAACAAGATCTTTCAGAAGCCA-TG--GGTTAACAACTT 417055 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||| || || | || || || || |||||| || || ||| || |||||| ||| Sbjct 417054 GGAATTCTCCTGCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATT 416995 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGAC 65541 | || ||| || |||||| ||| ||||| ||||| || || || Sbjct 416994 CGTTGAAGCCAAGGATTTGGCTGGTACTAGCAGTGGGCATAGGGGCAAC 416946 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 ||||| ||||| || ||||| || || | || || || || |||||||| | |||||| Sbjct 416497 GCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAATTTCC 416438 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 || || | |||| | | || || || | |||| || || ||||| ||||| || Sbjct 416437 GTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGATTACAG 416378 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||||||||| | |||| | ||| | || ||||| ||| | || | ||| |||| | Sbjct 416377 GCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAGATAGCGTAC 416318 Query 66188 CAAAG 66192 || || Sbjct 416317 CAGAG 416313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567811030960