Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 2e-12 seq4 89.7 2e-12 >seq14 Length=430876 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | || || ||||| | ||||| || ||||| | Sbjct 264206 CAATCGTCATACGAGACGGAATGGCGTGGGGATTAATGATCAGATCAGGAACAATGCCCT 264147 Query 364485 CAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | ||||| |||||||| || | |||| | | | ||| || || |||||||| | Sbjct 264146 CTCTTGTAAACGGCATATCCTCTTGTCGGAATG-TCACACCGATAGTACCCTTTTGACCG 264088 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | |||||| ||||| || |||||||| Sbjct 264087 TGGCGAGACGCAAATTTATCGCCAAT 264062 >seq4 Length=1783884 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 364420 CTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCAT 364479 ||| |||| ||||||||||||||||| | ||||||| ||||| || || ||||| || Sbjct 1569606 CTTGCCAACAGTCATACGAGAGGGAAAACCGTGAGGGTTCATGATAATATCTGGCACTAT 1569665 Query 364480 GCCGTCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTG 364539 ||| || | |||||||||||||| | | | | || | || | | ||||||||| Sbjct 1569666 GCCTTCGTCTGTAAAGGGCATATCAGCTTGCTCAGCAATAATGCCGACGACTCCCTTTTG 1569725 Query 364540 CGCATAGCGAGAAGCAAACTTGTCGCCAA 364568 | | |||||||| || || ||||||| Sbjct 1569726 GCCGTGGCGAGAAGAGAATTTATCGCCAA 1569754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885458145827