Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05- 20] 618 sequences; 101,068,960 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq597 691 0.0 >seq597 Length=1033019 Score = 691 bits (766), Expect = 0.0 Identities = 563/673 (84%), Gaps = 10/673 (1%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||| | Sbjct 992577 GCCCAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAACG 992636 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 992637 GGAGGTATATGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 992696 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| || |||||||||||||||||| Sbjct 992697 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAG 992756 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251 ||||||||||| |||||||| | ||| | ||| ||||| ||| |||||||||| Sbjct 992757 GGAAGCGCTTGTGACCAGACTCGGGCGCGGCGAATCACCCGGCGTTCTC-GCCGGTGCAC 992815 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGG 310 | ||| | |||||||||||||||| |||| ||| |||||| ||||||| |||| Sbjct 992816 TTCGACGCGCCCGGGCCAGCATCAGCTCGCCGCGG-GGGACAAAGGCGCCGGGAACGTGG 992874 Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGC 370 | ||| | ||| |||||||||||||| | | || || | || | |||| ||||| ||| Sbjct 992875 CTCCC--CAGGGAGTGTTATAGCCCGGCGCGCAACGCCCCGCGGC-GGACCGAGGTTCGC 992931 Query 371 GCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG 430 || | || ||||||||||||||||||| || | ||||||||| ||||||||||||| Sbjct 992932 GCGTCCGCAAGGATGCTGGCGTAATGGTCACCAGTGACCCGTCTTGAAACACGGACCAAG 992991 Query 431 GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACG 490 ||||| | |||||||||||| ||||||||||||| | |||| |||||||||||||| Sbjct 992992 GAGTCGTCCTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGCAATGAAAGTGAACG 993051 Query 491 GAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGA 550 |||| || || | || ||| ||||||||||||||||||| |||||||||||||| Sbjct 993052 CGGGTGAGAGCC--TCGCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGA 993109 Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610 ||| ||||||| | |||||||||||| ||||||||||||||| |||||||||||| Sbjct 993110 GTAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCC 993169 Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 993170 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATG 993229 Query 671 GGTATAGGGGCGA 683 || || ||||||| Sbjct 993230 GGCATGGGGGCGA 993242 Score = 383 bits (424), Expect = 7e-104 Identities = 347/428 (81%), Gaps = 23/428 (5%) Strand=Plus/Plus Query 265 GGCCAGCATCAGCTCGG-GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGG 323 |||||||||||||||| |||| ||| |||||| ||||||| ||||| ||| | ||| Sbjct 995231 GGCCAGCATCAGCTCGCCGCGGG-GGACAAAGGCGCCGGGAACGTGGCTCCC--CAGGGA 995287 Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTC--CGGCTAG 381 |||||||||||||| | | || || |||||| | | | || ||| || | | || || Sbjct 995288 GTGTTATAGCCCGGCGCGCAACGC--CCCGCCCCG-CGGCGGACCGAGCGCGTCCGCAAG 995344 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG-----GAGTCT 436 ||||||||||||||||| || | ||||||||| ||||||||||||| |||| Sbjct 995345 GATGCTGGCGTAATGGTCACCAGTGACCCGTCTTGAAACACGGACCAAGCCAAGGAGT-- 995402 Query 437 AACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 || |||||||||||| ||||||||||||| | |||| |||||||||||||| ||| Sbjct 995403 ----TCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGCAATGAAAGTGAACGCGGGT 995458 Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 | || || | || ||| ||||||||||||||||||| ||||||||||||||||| | Sbjct 995459 GAGAGCC--TCGCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAGG 995516 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 |||||| | |||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 995517 AGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGAGG 995576 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || Sbjct 995577 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGGGCAT 995636 Query 676 AGGGGCGA 683 ||||||| Sbjct 995637 GGGGGCGA 995644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079986743900