Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05-
20] 618 sequences; 101,068,960 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq597 356 4e-96
seq122 82.4 1e-13
>seq597
Length=1033019
Score = 356 bits (394), Expect = 4e-96
Identities = 234/257 (91%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 991485 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 991426
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 991425 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 991367
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
| || || | |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 991366 CACTGCCGGAGCAGTACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 991307
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 991306 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 991247
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 991246 AGAGCTCTCAATCTGTC 991230
>seq122
Length=739545
Score = 82.4 bits (90), Expect = 1e-13
Identities = 52/56 (93%), Gaps = 4/56 (7%)
Strand=Plus/Minus
Query 26 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT----TATTGCCTCAA 77
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 721674 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAGGTATTGCCTCAA 721619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796795229658
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |