Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05- 20] 618 sequences; 101,068,960 total letters Query= AAMG01001262.1 Length=237 Score E Sequences producing significant alignments: (Bits) Value seq354 300 2e-79 >seq354 Length=37668 Score = 300 bits (332), Expect = 2e-79 Identities = 199/214 (93%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 24 TCGAGATCCAGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGGCCGAATGGCGTC 83 |||||||| |||||||| |||||||||||||| || ||||||||||| |||| ||||||| Sbjct 32391 TCGAGATC-AGGAACGCAGCGGTCTTGCCGGTACCAGTCTGGGCGCGACCGA-TGGCGTC 32334 Query 84 TTTTGCCGGCCAGGGTGAAACCCAGCACCTAGCGCCTTGGATCGGCGTGCAGTACGGGAA 143 ||| ||| ||||||||||| |||||||||| |||||| |||||||||||||||||||||| Sbjct 32333 TTT-GCCCGCCAGGGTGAAGCCCAGCACCT-GCGCCT-GGATCGGCGTGCAGTACGGGAA 32277 Query 144 ACCCAGGTCCTGGATGGCGTGCATCAGTTCCGGGGCCAGTTTGAAATCGTGGAAGCGGGT 203 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 32276 GCCCAGGTCCTGGATGGCGTGCATCAGTTCCGGAGCCAGTTTGAAGTCGTGGAAGCGGGT 32217 Query 204 CTTGCCTTCCTGGGGCTCGACGACGAAGTCTTCG 237 |||||||||||| ||||||||||||||||||||| Sbjct 32216 CTTGCCTTCCTGAGGCTCGACGACGAAGTCTTCG 32183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 659196053452