Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05- 20] 618 sequences; 101,068,960 total letters Query= AAMG01001445.1 Length=285 Score E Sequences producing significant alignments: (Bits) Value seq368 315 1e-83 >seq368 Length=34501 Score = 315 bits (348), Expect = 1e-83 Identities = 237/283 (84%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 3 AGCTGGTGGGCTCGCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCG 62 || |||| || ||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 5065 AGTTGGTCGGTTCGCGTGCCCTGGGCCCGCGTGATCGGCTGGTGCTGGTGCAAGTGGGCG 5006 Query 63 AGGAGCAGATCCTGCTCGGCATCACCCCCGGCCGCATCACCCCGCTGCATGTACTCAAGA 122 | |||||||||||||| ||| |||| ||||| |||||||||||| |||| || ||||||| Sbjct 5005 AAGAGCAGATCCTGCTGGGCCTCACACCCGGTCGCATCACCCCGTTGCACGTGCTCAAGA 4946 Query 123 CCCCGGTGGACGCGGTCAAGACCGAAGCCGCCACGCNNNNNNNNNNNNAGCGCCTGATGG 182 | |||||| ||| || || | | ||||||||| ||||||| |||| Sbjct 4945 CACCGGTGAACGTGGATCAGTCGCAGCCCGCCACGCCAGAATTCGCCCAGCGCCTCATGG 4886 Query 183 AGTTGCTGGGCAAGGATCAAAAGGATAAGAAGTAATGCGCGTTTTGTTGACGCTCATGCT 242 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 4885 AGTTGCTGGGCAAGGATCAGAAGGATAAGAAGTAATGCGCGTTTTATTGACGCTCATGCT 4826 Query 243 GTTGCTGGCCGCACCGATGGCCCTGGGCGCCGACCCGTTGTCG 285 |||||||| ||| || |||| |||| |||||||||||||||| Sbjct 4825 GTTGCTGGTCGCGCCCTTGGCGCTGGCCGCCGACCCGTTGTCG 4783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 812795133868