Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05- 20] 618 sequences; 101,068,960 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq467 450 3e-124 >seq467 Length=13213 Score = 450 bits (498), Expect = 3e-124 Identities = 313/354 (88%), Gaps = 1/354 (0%) Strand=Plus/Minus Query 3 GACGAACTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGACTAC 62 ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 3685 GACGAGCTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGTTCGTCGGTGCGGTTGGACTAC 3626 Query 63 AGCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACA 122 ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct 3625 AGCGAACAGCCACCGATTCTGGCGGTGCGCCTGCAGGAATTGTTCGGGCTGGCAGACACC 3566 Query 123 CCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGG 182 |||||||| |||||||| || |||||||| ||| ||||||||||||||||| |||| || Sbjct 3565 CCGCGCATAGCCGGCGGCCGTCAGGTGGTGAAGCTGCACCTGCTGTCCCCGGCGCGACGG 3506 Query 183 CCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAG 242 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 3505 CCGGTGCAGGTGACGCAGGATCTGGCAAACTTCTGGCGCAGTACCTACGCCGACGTGAAG 3446 Query 243 AAGGATCTGAAGGGGCGGTATCCGAAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAA 302 |||||||||||||||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct 3445 AAGGATCTGAAGGGGCGGTACCCCAAGCACTACTGGCCGGATGACCCGTTGGTGGCCGAG 3386 Query 303 GCGACGGCGCGGATCAAACCCCGTAAGTAGCAACGACGGAGAT-CAACTGTGGG 355 | || || |||||||||| | ||| | ||||| | |||| ||| |||||| Sbjct 3385 CCCACTGCCAGGATCAAACCGAGAAAGCCGTAACGATGAAGATCCAAATGTGGG 3332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033593612352