Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05-
20] 618 sequences; 101,068,960 total letters
Query= AAMG01001645.1
Length=355
Score E
Sequences producing significant alignments: (Bits) Value
seq467 450 3e-124
>seq467
Length=13213
Score = 450 bits (498), Expect = 3e-124
Identities = 313/354 (88%), Gaps = 1/354 (0%)
Strand=Plus/Minus
Query 3 GACGAACTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGACTAC 62
||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 3685 GACGAGCTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGTTCGTCGGTGCGGTTGGACTAC 3626
Query 63 AGCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACA 122
||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct 3625 AGCGAACAGCCACCGATTCTGGCGGTGCGCCTGCAGGAATTGTTCGGGCTGGCAGACACC 3566
Query 123 CCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGG 182
|||||||| |||||||| || |||||||| ||| ||||||||||||||||| |||| ||
Sbjct 3565 CCGCGCATAGCCGGCGGCCGTCAGGTGGTGAAGCTGCACCTGCTGTCCCCGGCGCGACGG 3506
Query 183 CCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAG 242
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 3505 CCGGTGCAGGTGACGCAGGATCTGGCAAACTTCTGGCGCAGTACCTACGCCGACGTGAAG 3446
Query 243 AAGGATCTGAAGGGGCGGTATCCGAAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAA 302
|||||||||||||||||||| || ||||| || ||||||||||| ||||||||||||||
Sbjct 3445 AAGGATCTGAAGGGGCGGTACCCCAAGCACTACTGGCCGGATGACCCGTTGGTGGCCGAG 3386
Query 303 GCGACGGCGCGGATCAAACCCCGTAAGTAGCAACGACGGAGAT-CAACTGTGGG 355
| || || |||||||||| | ||| | ||||| | |||| ||| ||||||
Sbjct 3385 CCCACTGCCAGGATCAAACCGAGAAAGCCGTAACGATGAAGATCCAAATGTGGG 3332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1033593612352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |