Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05- 20] 618 sequences; 101,068,960 total letters Query= AAMG01001721.1 Length=387 Score E Sequences producing significant alignments: (Bits) Value seq424 403 4e-110 >seq424 Length=24847 Score = 403 bits (446), Expect = 4e-110 Identities = 314/378 (83%), Gaps = 3/378 (1%) Strand=Plus/Plus Query 1 CGAAACCGTGCGCTGTGTGGAGGAGGGCGTGTTGATGTCCACGGCGGATGCCAACGTTGG 60 ||| |||||||| |||||||||||||||||||||||||||||||| ||||| || || || Sbjct 3866 CGAGACCGTGCGGTGTGTGGAGGAGGGCGTGTTGATGTCCACGGCCGATGCGAATGTCGG 3925 Query 61 TTCAATCTTCGGCATCGGCTTTGCCGCGTGGAGTGGCGGCGCGTTGCAGTTTATCAACCA 120 ||| ||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||| Sbjct 3926 TTCCATCTTCGGCATCGGCTTTGCCGCCTGGAGCGGCGGCGCGCTGCAGTTCATCAACCA 3985 Query 121 GTACGGGCTGAACGACTTCATCGCCCGCGCCCGCTACCTGGCAGAGCAGTATGGGGAGCG 180 |||||| |||||||||| |||||| | ||||| |||||||| ||||||||||| ||||| Sbjct 3986 GTACGGTTTGAACGACTTTATCGCCAGGGCCCGTTACCTGGCTGAGCAGTATGGCGAGCG 4045 Query 181 CTTCTCGCCGCNNNNNNNNNNNNTGGAGAAAGCCGCGCAGGGTGAAGTGTTCCGGTAATC 240 || | |||| |||| |||||||||| ||||| ||| || Sbjct 4046 CTATGCACCGCCGGCGTTGCTGCTGGAAAAAGCCGCGCGGGGTGCTAGCTTC---TAGCG 4102 Query 241 AAAATGTAGGAGGGGAGAGCTTGCTTTGAAGGTGTATTTCAAGGCAGGCTCTGGGGTGTG 300 || | | | || || |||||| ||||||| ||||||||||||||||||||||||||| Sbjct 4103 AATAGGCACACTGGCAGGGCTTGCCTTGAAGGGGTATTTCAAGGCAGGCTCTGGGGTGTG 4162 Query 301 CAATATTCCCATCGCCGTGTCAGGTATTTTTTATGTCGCTACGCGTCTGCATCCTGGAAA 360 || |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 4163 CATTATTCCCATCACCGTGTCAGGTATTTTTTATGTCGCTACGCGTCTGCATTCTGGAAA 4222 Query 361 CCGATATTCTGCGCCCCG 378 ||||| | |||||||||| Sbjct 4223 CCGATGTCCTGCGCCCCG 4240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1135992979520