Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05-
20] 618 sequences; 101,068,960 total letters
Query= AAMG01002011.1
Length=284
Score E
Sequences producing significant alignments: (Bits) Value
seq368 396 4e-108
>seq368
Length=34501
Score = 396 bits (438), Expect = 4e-108
Identities = 259/284 (91%), Gaps = 1/284 (0%)
Strand=Plus/Minus
Query 1 TACGCCTTGCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCT 60
|||||| ||||||||||||| || ||||| ||||| ||| || |||| ||| ||||| ||
Sbjct 1065 TACGCCCTGCGGCCGCTGGACTTTGCGGTATTCCCCACG-ATCCTGCTGGTAGCGACGCT 1007
Query 61 GCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGG 120
||| || ||||| |||||||| ||||| || || ||||||||||| ||||||||||||||
Sbjct 1006 GCTGCGGCTGGCGTTGAACGTGGCCTCGACCCGCGTGGTGATGCTTCACGGCCAGGACGG 947
Query 121 CCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTA 180
||| ||||||||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 946 CCACGCCGCTGCCGGTAAGGTGATCCAAGCATTTGGTGAGGTGGTGATCGGCGGTAACTA 887
Query 181 CGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAA 240
|||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 886 CGTGGTTGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTCGTCGTGGTGACCAA 827
Query 241 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 809595153026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |