Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05- 20] 618 sequences; 101,068,960 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq446 482 4e-134 >seq446 Length=19579 Score = 482 bits (534), Expect = 4e-134 Identities = 284/294 (97%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TCGAGCAACGCCAGGAGACCACAGACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 60 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct 17940 TCGAGCAACGCCAAGAGACCGCAAACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 17881 Query 61 AGCGACATAGGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 17880 AGCGACATAGGACCTAACTATCCAACCTGAGCACCGCAAGGAAGGCTTCTT-GTGGAACT 17822 Query 121 TCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTG 180 ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 17821 TCCACGTTGCCTACTTGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCGAGCAGCTTG 17762 Query 181 CGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTG 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17761 CGCTTACGACTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTG 17702 Query 241 ACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 17701 ACGGAGGTCCGTGCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 17648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838394818688