Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05- 20] 618 sequences; 101,068,960 total letters Query= AAMG01002083.1 Length=362 Score E Sequences producing significant alignments: (Bits) Value seq335 226 6e-57 >seq335 Length=40308 Score = 226 bits (250), Expect = 6e-57 Identities = 265/358 (74%), Gaps = 0/358 (0%) Strand=Plus/Plus Query 5 GCCAGCGACGAGGCACGTACTCACCATTGGCGCTGTGGCAATGACATTGCCCACAGCTTG 64 ||| |||| || || || || ||| |||||||| ||||||||||| || |||||| || Sbjct 18294 GCCTGCGATGAAGCCCGCACCACCCACTGGCGCTGCGGCAATGACATCGCTCACAGCCTG 18353 Query 65 CAGGTAGCTGGGTTCAAGGGCCGCTTCCAGATGCTCAGCGACCCACTGTGCATGGGCCCC 124 || | || || ||||| |||| |||| ||||||| |||||| ||||||||||||| Sbjct 18354 CAACTGGCCGGTTTCAAAGGCCAGTTCCGCATGCTCACCGACCCCTTGTGCATGGGCCCG 18413 Query 125 GTACGCAATCTTCCCAGCGCCGAATTCCGCCGCCTGCGCAGCGCTTTTATCAGCCAGACT 184 |||||| | || ||||| | ||| || |||||||||||| || ||||||||| | Sbjct 18414 GTACGCGACCTGCCCAGTGAGAAATACCAGGCCCTGCGCAGCGCGTTCATCAGCCAGGCA 18473 Query 185 TTTGCCTTGACCCCTGCTGATGTAAACCTGCGCGTTGACGGGGAATACACCCAATTGGAC 244 ||| || || | | |||| || | | | || ||||||||||| || | Sbjct 18474 TTTACCCTGGACAAAGACGATGCCGCCCGCAGGCTGGCCGACGAATACACCCACCTGCAA 18533 Query 245 GCACTGGCCGGCGCCGAACATAGCGTGTTGTGGTGTGAAGCGGATGCCTATGACCAATTG 304 || |||||| ||||||| || |||||| ||||||| || || || |||||||||||| || Sbjct 18534 GCCCTGGCCAGCGCCGAGCACAGCGTGCTGTGGTGCGAGGCCGACGCCTATGACCAACTG 18593 Query 305 TTCCTGATTCGCGCACTCTCAAGTCTTGAACGCACGCCGAAAAAACTTGAGCTGATCG 362 |||||||| |||||| | || | || || ||| ||||| | | || |||||||||| Sbjct 18594 TTCCTGATCCGCGCATTGGCAGGCCTGGAGCGCGCGCCGCAGAGGCTGGAGCTGATCG 18651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055993473920