Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05-
20] 618 sequences; 101,068,960 total letters
Query= AAMG01002110.1
Length=382
Score E
Sequences producing significant alignments: (Bits) Value
seq526 338 1e-90
>seq526
Length=5470
Score = 338 bits (374), Expect = 1e-90
Identities = 308/387 (80%), Gaps = 10/387 (3%)
Strand=Plus/Plus
Query 3 AGCGCAAAGAAGTGCAACATGCGTTCGGCATCCAGGGTCTGG---TGCCGCTCCAGGTAG 59
|| ||||||||||||| || | | ||||| | ||| || | || || || ||||
Sbjct 667 AGGGCAAAGAAGTGCAGCAGGTGCTCGGCGTGCAG---CTCGCCATGGCGATCGCGGTAA 723
Query 60 CTGTCCAGGGTGCCGCTGCTGAGCAACGACATCGCCAGTTCATCCAGGCCATCGCTGCGC 119
|||||||||||| || | ||||||| ||| |||||||| | || |||||||| ||||
Sbjct 724 TCATCCAGGGTGCCGGTGATCAGCAACGGCATGGCCAGTTCGTGCAAGCCATCGCCGCGC 783
Query 120 CCGGCCTGGGGCATCAAGGACAACGAATAACTGACTTCCAGCATGCGTGCCAGGTTCTCG 179
||| |||||||||||| |||| |||||| ||||| ||||||||||| || ||||| ||
Sbjct 784 CCGTCCTGGGGCATCAGCGACAGCGAATAGCTGACATCCAGCATGCGCGCGAGGTTTTCC 843
Query 180 GCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGTTCTACGCAGCAT---- 235
|||||||||||||| ||||||||||| |||| ||| | || ||||||| ||||||
Sbjct 844 GCGCGCTCCAGGTAGCGCGACATCCAGTACAAATCCGAGGCAGTTCTACTCAGCATGGCA 903
Query 236 ACTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACC 295
|||| |||| |||||||||||||| ||||| || ||||| || ||||||||||| |||
Sbjct 904 TTTCAGTCCTCTACCACCCAGGTGTCTTTGGTGCCGCCGCCCTGGGACGAGTTGACCACC 963
Query 296 AGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTG 355
||||| || || |||||| |||||||||||||| || ||||||| ||| |||||||||
Sbjct 964 AGCGAACCCTCACGCAGCGCTACGCGGGTCAAGCCGCCAGGCACCACGCGAGTTTCCTTG 1023
Query 356 CCCGAGAGCACGAAGGGTCGCAAGTCG 382
|| || | |||||| || |||| ||||
Sbjct 1024 CCGGACAACACGAACGGGCGCAGGTCG 1050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1119993078400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |