Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F001648815.1_202016-05- 20] 618 sequences; 101,068,960 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq526 338 1e-90 >seq526 Length=5470 Score = 338 bits (374), Expect = 1e-90 Identities = 308/387 (80%), Gaps = 10/387 (3%) Strand=Plus/Plus Query 3 AGCGCAAAGAAGTGCAACATGCGTTCGGCATCCAGGGTCTGG---TGCCGCTCCAGGTAG 59 || ||||||||||||| || | | ||||| | ||| || | || || || |||| Sbjct 667 AGGGCAAAGAAGTGCAGCAGGTGCTCGGCGTGCAG---CTCGCCATGGCGATCGCGGTAA 723 Query 60 CTGTCCAGGGTGCCGCTGCTGAGCAACGACATCGCCAGTTCATCCAGGCCATCGCTGCGC 119 |||||||||||| || | ||||||| ||| |||||||| | || |||||||| |||| Sbjct 724 TCATCCAGGGTGCCGGTGATCAGCAACGGCATGGCCAGTTCGTGCAAGCCATCGCCGCGC 783 Query 120 CCGGCCTGGGGCATCAAGGACAACGAATAACTGACTTCCAGCATGCGTGCCAGGTTCTCG 179 ||| |||||||||||| |||| |||||| ||||| ||||||||||| || ||||| || Sbjct 784 CCGTCCTGGGGCATCAGCGACAGCGAATAGCTGACATCCAGCATGCGCGCGAGGTTTTCC 843 Query 180 GCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGTTCTACGCAGCAT---- 235 |||||||||||||| ||||||||||| |||| ||| | || ||||||| |||||| Sbjct 844 GCGCGCTCCAGGTAGCGCGACATCCAGTACAAATCCGAGGCAGTTCTACTCAGCATGGCA 903 Query 236 ACTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACC 295 |||| |||| |||||||||||||| ||||| || ||||| || ||||||||||| ||| Sbjct 904 TTTCAGTCCTCTACCACCCAGGTGTCTTTGGTGCCGCCGCCCTGGGACGAGTTGACCACC 963 Query 296 AGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTG 355 ||||| || || |||||| |||||||||||||| || ||||||| ||| ||||||||| Sbjct 964 AGCGAACCCTCACGCAGCGCTACGCGGGTCAAGCCGCCAGGCACCACGCGAGTTTCCTTG 1023 Query 356 CCCGAGAGCACGAAGGGTCGCAAGTCG 382 || || | |||||| || |||| |||| Sbjct 1024 CCGGACAACACGAACGGGCGCAGGTCG 1050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1119993078400