Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F002077885.1_202017-04- 03] 3,687 sequences; 112,137,038 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3225 446 3e-123 >seq3225 Length=6454 Score = 446 bits (494), Expect = 3e-123 Identities = 288/314 (92%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||| ||| |||||| Sbjct 1008 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGCGTGGCGGGGA 1067 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| ||||||||||||| Sbjct 1068 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 1127 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1128 TAGCATGGAATAATGAAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 1187 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| Sbjct 1188 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATGGTCAGAGGTGAAATTCTTGG 1247 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 || ||||||||||||||||||||||||| || |||||||||||||||||||||| || Sbjct 1248 ATCCATTGAAGACTAACTACTGCGAAAGCATTTGTCAAGGATGTTTTCATTAATCAG-GA 1306 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 1307 ACGAAAGTTAGGGG 1320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915166256576