Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F002077885.1_202017-04- 03] 3,687 sequences; 112,137,038 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3225 695 0.0 >seq3225 Length=6454 Score = 695 bits (770), Expect = 0.0 Identities = 564/673 (84%), Gaps = 10/673 (1%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||||||| | Sbjct 2859 GCCCAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAACG 2918 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2919 GGAGGTATATGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT 2978 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| |||||| |||||| || |||||||||||||||||| Sbjct 2979 GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAG 3038 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCAC 251 ||||||||||| |||||||| | ||| | ||| ||||| ||| |||||||||| Sbjct 3039 GGAAGCGCTTGTGACCAGACTCGGGCGCGGCGAATCACCCGGCGTTCTC-GCCGGTGCAC 3097 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGG 310 | ||| | |||||||||||||||| |||| ||| |||||| ||||||| |||| Sbjct 3098 TTCGACGCGCCCGGGCCAGCATCAGCTCGCCGCGG-GGGACAAAGGCGCCGGGAACGTGG 3156 Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGC 370 | ||| | ||| |||||||||||||| | | || || | || | |||||||||| ||| Sbjct 3157 CTCCC--CAGGGAGTGTTATAGCCCGGCGCGCAACGCCCCGCGGC-GGACTGAGGTTCGC 3213 Query 371 GCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG 430 || | || ||||||||||||||||||| || | ||||||||| ||||||||||||| Sbjct 3214 GCGTCCGCAAGGATGCTGGCGTAATGGTCACCAGTGACCCGTCTTGAAACACGGACCAAG 3273 Query 431 GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACG 490 ||||| | |||||||||||| ||||||||||||| | |||| |||||||||||||| Sbjct 3274 GAGTCGTCCTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGCAATGAAAGTGAACG 3333 Query 491 GAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGA 550 |||| || || | || ||| ||||||||||||||||||| |||||||||||||| Sbjct 3334 CGGGTGAGAGCC--TCGCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGA 3391 Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610 ||| ||||||| | |||||||||||| ||||||||||||||| |||||||||||| Sbjct 3392 GTAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCC 3451 Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 3452 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATG 3511 Query 671 GGTATAGGGGCGA 683 || || ||||||| Sbjct 3512 GGCATGGGGGCGA 3524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079920913850