Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F002077885.1_202017-04- 03] 3,687 sequences; 112,137,038 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1570 120 8e-25 >seq1570 Length=51532 Score = 120 bits (132), Expect = 8e-25 Identities = 196/278 (71%), Gaps = 11/278 (4%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||||||||| | |||||||| |||| Sbjct 11953 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 11894 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 11893 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 11834 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA---GAGCTTCGCGT-TAGCTAAC 186 | |||| ||||||| || ||||||| ||| || | | | || || ||| Sbjct 11833 CA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCGACGTCAAATAATAGTATATTTAAT 11775 Query 187 CCCATCAATTAACC--TTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGT 244 || |||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 11774 TATCTCTGTTAACCAAAGCCGGCACCGGGCAGATTTCACACTTTATACTTAGATTTTTTT 11715 Query 245 GTTT----GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | ||| ||||||||||||| | |||||||||| Sbjct 11714 ATCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 11677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260753514304