Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F002077885.1_202017-04- 03] 3,687 sequences; 112,137,038 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1842 93.3 1e-16 >seq1842 Length=65858 Score = 93.3 bits (102), Expect = 1e-16 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || |||| | ||||||| | |||||||||| Sbjct 5107 GGGGACAAAGACAAGTCATCATGGCCTTTATATTGTGGGCTATAAACGTGCTACATCTTC 5048 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | | |||||| | || ||| | || | |||| |||| || ||| | | | | || Sbjct 5047 CTAGACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATAAAAATT 4988 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| || ||||||| ||||| | ||| ||||||||||| ||| Sbjct 4987 TTAAGGATTGTAGTCTGAAATTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATC 4928 Query 471 AGCATGCTACGGTGAAT 487 | |||| ||||||||| Sbjct 4927 ACCATGTCACGGTGAAT 4911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503944547520