Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F002077885.1_202017-04-
03] 3,687 sequences; 112,137,038 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq3225 356 4e-96
seq2829 82.4 1e-13
>seq3225
Length=6454
Score = 356 bits (394), Expect = 4e-96
Identities = 234/257 (91%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1820 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1761
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 1760 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 1702
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
| || || | |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1701 CACTGCCGGAGCAGTACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 1642
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1641 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 1582
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 1581 AGAGCTCTCAATCTGTC 1565
>seq2829
Length=71982
Score = 82.4 bits (90), Expect = 1e-13
Identities = 52/56 (93%), Gaps = 4/56 (7%)
Strand=Plus/Minus
Query 26 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT----TATTGCCTCAA 77
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 8329 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAGGTATTGCCTCAA 8274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796771540047
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |