Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F002077885.1_202017-04- 03] 3,687 sequences; 112,137,038 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq3225 246 3e-63 >seq3225 Length=6454 Score = 246 bits (272), Expect = 3e-63 Identities = 167/186 (90%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||||||||||||||||||||||||| | || | |||||||| |||||||||| Sbjct 1065 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 1124 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||||| Sbjct 1125 CATTAGCATGGAATAATGAAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 1183 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| |||||||||||| |||| ||||||||||| Sbjct 1184 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATGGTCAGAGGTGAAATTC 1243 Query 181 TTGGAT 186 |||||| Sbjct 1244 TTGGAT 1249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511981712480