Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiocordyceps_20sinensis_20[genbank_20GCA_5F002077885.1_202017-04-
03] 3,687 sequences; 112,137,038 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq3225 246 3e-63
>seq3225
Length=6454
Score = 246 bits (272), Expect = 3e-63
Identities = 167/186 (90%), Gaps = 1/186 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| | || | |||||||| ||||||||||
Sbjct 1065 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 1124
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1125 CATTAGCATGGAATAATGAAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 1183
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| |||||||||||| |||| |||||||||||
Sbjct 1184 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATGGTCAGAGGTGAAATTC 1243
Query 181 TTGGAT 186
||||||
Sbjct 1244 TTGGAT 1249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511981712480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |