Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20unilateralis_20[genbank_20GCA_5F001272575.1_202015- 08-21] 6,790 sequences; 25,493,697 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3644 187 1e-44 seq1436 96.9 1e-17 >seq3644 Length=430 Score = 187 bits (206), Expect = 1e-44 Identities = 124/138 (90%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 ||||||| ||||||| ||||||| | ||||| ||||||||| | ||||||||||||| Sbjct 430 GCAGCTCAAAATGGGTGGTAAATGCCATCTAAGGCTAAATATAGAGGAGAGACCGATAGC 371 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 ||||||||||||||||||||||||||||||||||||| |||||| |||||| || ||||| Sbjct 370 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTG 311 Query 180 AAATTGTTGAAAGGGAAG 197 |||||||||||||||||| Sbjct 310 AAATTGTTGAAAGGGAAG 293 Score = 86.0 bits (94), Expect = 3e-14 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||| |||| |||||| | | || ||||||||| ||||||||||||||||||||| Sbjct 72 TAGGATGTTGGCTTAATGGCTCTCTGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAA 13 Query 439 CATCTATGCGAG 450 ||| |||||||| Sbjct 12 CATGTATGCGAG 1 >seq1436 Length=1782 Score = 96.9 bits (106), Expect = 1e-17 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 29 GCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTC 88 ||||||||| |||||||||| |||||||||||| |||| ||| |||||||| | |||| Sbjct 1782 GCTCCTTCGGCGAGTCGAGTAGTTTGGGAATGCTGCTCAAAACGGGAGGTATACGCCTTC 1723 Query 89 TAAAGCTAAATATTGGCCAGA 109 |||||||||||| ||||||| Sbjct 1722 TAAAGCTAAATACCGGCCAGA 1702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079854354500