Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophiocordyceps_20unilateralis_20[genbank_20GCA_5F001272575.1_202015-
08-21] 6,790 sequences; 25,493,697 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq3878 242 1e-61
seq5161 178 4e-42
>seq3878
Length=413
Score = 242 bits (268), Expect = 1e-61
Identities = 137/139 (99%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 60
Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ACCCGCGCTTGGTTGAATTACTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 120
Query 525 GCGTCAACATCACTTTCTG 543
||||||||| |||||||||
Sbjct 121 GCGTCAACACCACTTTCTG 139
>seq5161
Length=354
Score = 178 bits (196), Expect = 4e-42
Identities = 106/111 (95%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || || |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 116 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 57
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117
||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 56 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCA 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635088969920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |