Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiocordyceps_20unilateralis_20[genbank_20GCA_5F001272575.1_202015- 08-21] 6,790 sequences; 25,493,697 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3878 242 1e-61 seq5161 178 4e-42 >seq3878 Length=413 Score = 242 bits (268), Expect = 1e-61 Identities = 137/139 (99%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 60 Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 61 ACCCGCGCTTGGTTGAATTACTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 120 Query 525 GCGTCAACATCACTTTCTG 543 ||||||||| ||||||||| Sbjct 121 GCGTCAACACCACTTTCTG 139 >seq5161 Length=354 Score = 178 bits (196), Expect = 4e-42 Identities = 106/111 (95%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 116 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 57 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117 ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 56 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635088969920