Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq925 154 8e-36 seq11681 105 4e-21 >seq925 Length=9339 Score = 154 bits (170), Expect = 8e-36 Identities = 105/117 (90%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| |||||||||||| |||||||||| ||||||||| || Sbjct 2348 GAACCCAAAAACTTTACTTTCGTGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 2290 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| Sbjct 2289 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACAACGGTATCTGATCGTTTTCGA 2233 >seq11681 Length=1955 Score = 105 bits (116), Expect = 4e-21 Identities = 80/93 (86%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 18 TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATA 77 |||| | |||||||||| ||||| |||| ||||||||| ||||||||||||||||||| Sbjct 117 TTTCGCTTAAGGTGCCGCACGAGTTAAAAA-ATAACATCGTCCGATCCCTAGTCGGCATA 59 Query 78 GTTTACGGTTAAGACTACGACGGTATCTGATCG 110 ||||| || |||||||| ||||||||| |||| Sbjct 58 GTTTATAGTAAAGACTACAACGGTATCTAATCG 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278324654520