Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq27488 95.1 3e-17 >seq27488 Length=11718 Score = 95.1 bits (104), Expect = 3e-17 Identities = 186/270 (69%), Gaps = 15/270 (6%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||| ||||| | |||||||| Sbjct 6380 TAAACTGTATCTGCACAGTTATTCCAATTTCACAGAGTCAATCATAGAGACAGCTGTTGT 6439 Query 67 ATCGTTACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 |||||| | |||||| |||| | | | | ||| | | ||||| ||| |||||||||||| Sbjct 6440 ATCGTTGCACCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGG 6499 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TT-----CGCG 177 ||| | | || ||||||| || |||||| ||| || | | | || | Sbjct 6500 ACCCTCAGGTATAAGGCCGCCATTAGCCGGGGGTTCCTTCTACACCAAATTTTTGACAAT 6559 Query 178 TTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA 237 |||| || || |||||| ||||||||||||||| |||||| | |||| | | Sbjct 6560 TTAGTTA----TTTCCGTTAACCAGCCGGCACCGGGCAGGTCTCACACTCAATACTTAGA 6615 Query 238 CTT-TCGTGTT-TGCAGAGTGCTGTGTTTT 265 || || | || ||||||||||||||||| Sbjct 6616 TTTATCATCTTGGGCAGAGTGCTGTGTTTT 6645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260436032256