Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 343 1e-89 seq8 154 1e-32 >seq4 Length=3244807 Score = 343 bits (380), Expect = 1e-89 Identities = 1224/1887 (65%), Gaps = 66/1887 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||||||||| | | || || ||| |||| | || ||||||| || ||| Sbjct 1907283 TCTACAGTGAACTGGATAGGAGCAGAGGCAGCCATGGTTCGTAGGTAGTACAATCCAGTC 1907342 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 || || ||| |||| | || ||||| || | | || |||| | | ||||| Sbjct 1907343 TTCAGCCCAAGCTTCCAACCGGCAAAGTGCATGGACG-TGATCTTGCCCATGGTAGGCTC 1907401 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||| || |||| ||||||| |||||||||| | |||||| || || | ||| Sbjct 1907402 CTTCATATGAATGTTCAGCGACTGAGACTGATCGATGAAGGCACCACGGTCAGCGGACAT 1907461 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | |||||| ||| ||| || ||||| ||||||||||||||| | | | | |||| Sbjct 1907462 CTGAATGATGTTACGCTGCGAGATTTCCCAAACGGTCTTGTACAGG-GCCTTGATCTCAT 1907520 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||||| | ||| ||||| ||||||| | || || || || || ||| Sbjct 1907521 CGGGAATGTTGGGGATGCGCTGGATGGAACCACCATCGGCGATGATTCGGTTCTTCATGT 1907580 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATGACT 65431 |||||||| | |||| |||| ||||| |||| |||||| | |||| ||| Sbjct 1907581 TGTCTGACCAGAGGCCCATGTCGACAAGATCCTTGAGCAACCAAGGG----TTGACGACC 1907636 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 |||||||| || | || || ||||| ||||||||||| ||| ||| || ||| | Sbjct 1907637 TGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGGGCTCGAAGCAC 1907696 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||| || || || || | |||||| || || |||||||| || || | ||| ||| Sbjct 1907697 TCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCACGAGCAAAGAG 1907756 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTT 65609 || || | |||| | |||| || | ||| |||||| ||||| ||||| Sbjct 1907757 TTGCGGACACCGTGCTGGGCAATCTTCTCCTTCAAAGACGCCCAGTCCCACAAGTCGGT- 1907815 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 | ||| |||||| || | ||| || | || | | || || | Sbjct 1907816 -------GGGGGTGACGTTCCACATGTCGTATTGGAGAATGCCCTGAGAAACAGGAGACC 1907868 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGG 65729 | | | |||||| ||| ||||||||| || | ||| | | || | Sbjct 1907869 CTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAGGACGAAGTCAAAGCTG 1907928 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 | || |||||||| || || | || |||| ||||| ||| | | Sbjct 1907929 CGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCCTCGGGAGATTCGAAAG 1907988 Query 65790 GCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 |||||| | |||| || || || || |||||||| || || | ||||| ||| || Sbjct 1907989 GCATACGAA--GAGACAGGAAGGTATCAGCAAGACCTTGTACACCGAGACCGACGGGCCG 1908046 Query 65848 ATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCG 65907 || | || ||| | ||||| || || ||||||| |||| ||||| || Sbjct 1908047 GTGCCTGAAGTTGCTCTTACGAGCCTCCGGGACGGGGTAGTGGTTGACCTCGATGATCTT 1908106 Query 65908 ATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTT 65966 ||||| ||||| || || | || || | ||| | | | | ||| ||||| Sbjct 1908107 GTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGT-GAAGCTTCTGGAAGTCAAA----- 1908160 Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 | | | || | | | | || ||| | || ||||| ||||| || || |||| Sbjct 1908161 CACGCCATTC-----TTCTCGTCGACA--AACCTAGGGAGGGCGAGAGAGGCAAGATTGC 1908213 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 | || || | ||||||||| ||||| ||||||| || || ||||| || || || || Sbjct 1908214 ATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCTGC 1908273 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 | || || || | |||| || ||||||||||| ||||| || |||||||| | ||||| Sbjct 1908274 GGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGT 1908333 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA------GAGCGCG-- 66198 | || | ||||||||| || | ||| | ||| || | ||| | | || || Sbjct 1908334 AGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAGCTTCTGGGCACGGA 1908393 Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258 || ||| ||| | || || ||| || |||||| |||| || ||||| Sbjct 1908394 TGGTCTCA-CGTCC--ACGGC----CCTCAGC-TTCGTACCTGGCGTACAGAGCCTCGAA 1908445 Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318 ||||| | || || | |||| || || | ||||| | ||| | ||| || Sbjct 1908446 CTCCTCACCGTAGACATCTGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAGTCCACTC 1908505 Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378 |||| || || ||||| ||| || || || |||| ||| || || ||||| || || Sbjct 1908506 GCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGTC 1908565 Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438 || || ||| |||||| ||||||| || || |||||||| ||||| ||| | ||| Sbjct 1908566 ACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGTC 1908625 Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498 || ||||| || ||||||||||||||||| | ||| ||| ||| |||||| ||||| Sbjct 1908626 TGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTC 1908685 Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558 ||||| | ||| |||||| ||||||| | ||| || | ||| ||||| || | || Sbjct 1908686 AACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTACC 1908745 Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618 ||||| || ||||| || || || || || ||| || |||||||||||||| Sbjct 1908746 GTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATACC 1908805 Query 66619 ACCGGCCGTCTTCGAG---ATGGCAGCACAATCGGCCAC-TGTCCGGAATATGCCGTCAA 66674 || || ||||| ||| ||||| |||| || | || |||| | | || || || | Sbjct 1908806 GCCAGCAGTCTTGGAGATCATGGC-GCAC-GTCTTCAACGTGTC--GTAGATACCCTCGA 1908861 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 || ||| |||| ||| | ||| |||| || | ||| || ||||| | | Sbjct 1908862 TGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCG 1908921 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | ||| || || || | ||||||||| ||| | | | ||||| | ||| |||| Sbjct 1908922 CATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCT 1908981 Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTAT 66853 |||| | ||||| | ||||| || || || | || ||| |||||||| | || Sbjct 1908982 CGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACA-CGCATCAGCATGTGC 1909040 Query 66854 TGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTG 66913 || || || ||| | | | | ||||| | | | ||| || || |||||||||||| Sbjct 1909041 TGTGGACGCTCGGCTACCTTGCCATTGATGCGGAGAAGGTATGATCGCTCCAGGGTCTTG 1909100 Query 66914 ATACCAAAGTACGAGTAATTGAAATCG 66940 | |||||| | ||| ||||| ||| Sbjct 1909101 AACCCAAAGAATTGGTAGTTGAAGTCG 1909127 >seq8 Length=2222996 Score = 154 bits (170), Expect = 1e-32 Identities = 214/294 (73%), Gaps = 7/294 (2%) Strand=Plus/Minus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| ||||| ||||||||||||||||| | |||||| ||||| ||||| Sbjct 706065 TGGCAAATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATCGATCTGTCC 706006 Query 61150 AAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACA 61205 || || || | |||||| | ||| | | || || || | ||||| ||| Sbjct 706005 AAGGATCTGCACGACTGGAACAAGCGCCTCAATGA-CGACGAGCGCTTCTTCATCTCACA 705947 Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265 || | || ||||| || || ||||||||||||||||| ||||| || | || || || Sbjct 705946 CGTCCTTGCCTTCTTCGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGATT 705887 Query 61266 C-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGG 61324 | ||| || |||| || | | |||||||| || ||||||||||||||||| |||| Sbjct 705886 CAGCGGAG-AGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGATGG 705828 Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 |||| ||||||| |||| ||| | | ||||| || |||||||| |||| Sbjct 705827 AGAACATCCACTCCGAGACATACTCCCTCTTGATCGACACATACATCAGCGAGC 705774 Score = 132 bits (146), Expect = 4e-26 Identities = 291/434 (67%), Gaps = 3/434 (1%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 ||||| || | ||||||||| | || ||||| || || ||||| | ||||| ||| | Sbjct 705602 GCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTTGCGTCCATCTTCTGGCTC 705543 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| ||||| |||||| ||| ||| | || || || |||||| Sbjct 705542 AAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 705483 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 |||||||| ||| || || | || ||| | || || || || || Sbjct 705482 GGCATGCACACTGACTTCGCCTGCCTCCTCTTC--TCCCT-CCTCAAGACCCGCCCTGAC 705426 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 || ||| || | || || | |||| || ||||| |||| || || ||| Sbjct 705425 AAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCATCGAGAAGGAGTTCCTCACT 705366 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||||| ||||| | | || |||||||||| | || |||| ||||| || || Sbjct 705365 GACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTCTTATGTGCCAGTACATCGAG 705306 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || |||||||| ||| | | | | | || | | | |||| || ||| ||| Sbjct 705305 TTCGTCGCCGACCGCCTGCTCCTGGCTCTCGGCAACACCAAGGTCTACAACGCGACCAAC 705246 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||| | || ||||| | |||||||| || || |||||||| || Sbjct 705245 CCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGC 705186 Query 61918 GTAGGCGACTATCA 61931 || ||||| || || Sbjct 705185 GTCGGCGATTACCA 705172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567704433040