Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq491 931 0.0 >seq491 Length=2268 Score = 931 bits (1032), Expect = 0.0 Identities = 622/686 (91%), Gaps = 6/686 (1%) Strand=Plus/Minus Query 1 TACGTGACCGGTGGCCTA-GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59 |||||| || | |||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct 1531 TACGTGGTCGCTAGCCTTCGCCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAAT 1472 Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1471 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGC 1412 Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 1411 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAATAGCACGTG 1352 Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239 |||||||||||||||||||||||||| ||||||||||| | ||||||| | |||| | | Sbjct 1351 AAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACTTGCCTGTAGTTGCTTATCCGGACTTT 1292 Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299 | ||||||||||||||||||| |||||||||||||| | ||||||| ||||||||| | Sbjct 1291 TGTCCGGTGCACTCTTCTGCGGGCAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCT 1232 Query 300 CGGGAATGTGGCCCCCTTCGGGG-GGTGTTATAGCCCGGGGTGGA-ATGCGGCCCGCCTG 357 | | |||| | | |||||||| | |||||| || | || |||| || ||||| Sbjct 1231 CTGTCATGTACCTCTCTTCGGGGAGAACTTATAG--GGGAGACGACATGCAACCAGCCTG 1174 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct 1173 GACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGA 1114 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 1113 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCAGACGCGTA 1054 Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537 |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 1053 ATGAAAGTGAACGGAGGTGGGAACCC-TTTGGGTGCACCATCGACCGATCCTGATGTCTT 995 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 994 CGGATGGATTTGAGTAAGAGCATGGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGA 935 Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 934 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 875 Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||| |||||||||| Sbjct 874 ATCGTCAAATTTGGGCATAGGGGCGA 849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079987644800