Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29]
576 sequences; 38,548,368 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq491 931 0.0
>seq491
Length=2268
Score = 931 bits (1032), Expect = 0.0
Identities = 622/686 (91%), Gaps = 6/686 (1%)
Strand=Plus/Minus
Query 1 TACGTGACCGGTGGCCTA-GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAAT 59
|||||| || | |||| ||||||| |||| ||||||||||||||||||||||||||||
Sbjct 1531 TACGTGGTCGCTAGCCTTCGCCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAAT 1472
Query 60 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGC 119
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1471 GCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGC 1412
Query 120 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTG 179
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1411 GCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTCAAATAGCACGTG 1352
Query 180 AAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT 239
|||||||||||||||||||||||||| ||||||||||| | ||||||| | |||| | |
Sbjct 1351 AAATTGTTGAAAGGGAAGCGCTTGCAGCCAGACTTGCCTGTAGTTGCTTATCCGGACTTT 1292
Query 240 CGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCC 299
| ||||||||||||||||||| |||||||||||||| | ||||||| ||||||||| |
Sbjct 1291 TGTCCGGTGCACTCTTCTGCGGGCAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCT 1232
Query 300 CGGGAATGTGGCCCCCTTCGGGG-GGTGTTATAGCCCGGGGTGGA-ATGCGGCCCGCCTG 357
| | |||| | | |||||||| | |||||| || | || |||| || |||||
Sbjct 1231 CTGTCATGTACCTCTCTTCGGGGAGAACTTATAG--GGGAGACGACATGCAACCAGCCTG 1174
Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417
||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1173 GACTGAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGA 1114
Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1113 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAGCCCAGACGCGTA 1054
Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1053 ATGAAAGTGAACGGAGGTGGGAACCC-TTTGGGTGCACCATCGACCGATCCTGATGTCTT 995
Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 994 CGGATGGATTTGAGTAAGAGCATGGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGA 935
Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 934 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 875
Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||| ||||||||||
Sbjct 874 ATCGTCAAATTTGGGCATAGGGGCGA 849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079987644800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |