Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29]
576 sequences; 38,548,368 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq487 100 7e-19
>seq487
Length=2900
Score = 100 bits (110), Expect = 7e-19
Identities = 275/419 (66%), Gaps = 27/419 (6%)
Strand=Plus/Plus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||||||| || ||| || |||||||||| | | |||||||| |||||| |
Sbjct 390 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGCATCGTGAG 449
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
||||| ||| | | | ||| | ||||| ||||||||||||||||||| | ||
Sbjct 450 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 509
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG----CTAACC 187
| || ||||||| || | |||| ||| |||| | || || |||| ||||
Sbjct 510 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTAGGCTATTTTAGTCGTCTAAGT 569
Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247
||| |||||| || || |||||| | ||| |||||| | | || | | ||
Sbjct 570 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACATTGATTTACATCTT 629
Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCT----GGTATCTTCGACC 300
||| ||||||||||||| | ||||||||| ||| | | | || || || ||
Sbjct 630 ACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC 689
Query 301 GGCA-TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359
|| ||| ||| ||| | | ||| ||||||||||| ||||||
Sbjct 690 TACACTGATATTA------------ATCAACAGGAATGGCACACCTTCTCCCTCAGTTAC 737
Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418
|||| | |||||| |||||||| ||| ||||| |||||| |||||||||||
Sbjct 738 GGTGTCAATTTGCCGAGTTCCTTAATGATTGTTAGCTCAAACGCCTTCGTATTCTCTAC 796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260792737792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |