Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29]
576 sequences; 38,548,368 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq487 82.4 2e-13
>seq487
Length=2900
Score = 82.4 bits (90), Expect = 2e-13
Identities = 259/390 (66%), Gaps = 46/390 (12%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64
|||||||| | ||| || |||||| ||| | || ||||||||| ||| ||||
Sbjct 390 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAATCATTGAGACAGCTGTTGC----ATCG 445
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
| | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| |
Sbjct 446 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 505
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT--GC--TTCGATTGCTC 176
|||| || ||||||| || | ||||| || |||| || || || | | ||
Sbjct 506 CATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGGCTATTTTAGTCGTC 564
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233
||| | || |||||| ||| || |||||| ||| || || |||||||| | |
Sbjct 565 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACATTGATT 621
Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCG-----------CTTGGGCCT 281
| | |||| ||| | ||||||||| |||||||||| || | ||
Sbjct 622 TACATCTTACGCAAAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCT 681
Query 282 ATTCTCTGCGGC-CTG----TCATAGACA-----GGCACCCCTTCTCCCTAAGTTACGGG 331
||| | | | ||| | || ||| ||||| |||||||||| ||||||||
Sbjct 682 CCTCT-TCCTACACTGATATTAATCAACAGGAATGGCACACCTTCTCCCTCAGTTACGGT 740
Query 332 GTCATTTTGCCGAGTTCCTTAACAATAGTT 361
|||| ||||||||||||||||| || |||
Sbjct 741 GTCAATTTGCCGAGTTCCTTAATGATTGTT 770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062393880576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |