Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 2e-19
>seq1
Length=30948
Score = 102 bits (112), Expect = 2e-19
Identities = 197/288 (68%), Gaps = 16/288 (6%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| |||||| ||| ||||||||| ||||| | ||||||||
Sbjct 22955 TAAACTGTATCTGCACAGCTATTCCAATTTCACCGAGTCAATCATTGAGACAGCTGTTGT 23014
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 23015 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 23074
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCT------TCGC 176
|| | || | || ||||||| || | |||| ||| |||| |||| |
Sbjct 23075 CCCTCATCGGTAAGGCCGCCATTGATTGGGGTTTCCTTCAAACTCTAGCTCAATAATATA 23134
Query 177 GTTAGCT----AACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATAC 232
||| || || ||| |||||| || || ||||||| | |||||| | ||||
Sbjct 23135 CTTATCTTACAAAAGAAATCCGTTAACCAGCCAACATCGGGCAGACATCACACTCAATAC 23194
Query 233 GTCCACTTT-CGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | ||| | | || |||| |||||| |||||| | ||||||||||
Sbjct 23195 TTTGATTTTACATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 23242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260799823488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |